Re: [R] NMDS QUESTION

2013-09-01 Thread Simona Augyte
Ok, thanks, that helps. What about running the same code on a bit of a different set of data, ex.; korma<- read.csv(text=" GR T C M B 1 0 0 0 1 2 0 1 0 0 3 1 1 0 1 4 1 0 1 1 5 0 0 0 1 6 1 0 1 1... ",sep="",row.names=1,header=TRUE) str(korma) dist(korma) korma.dist<- dist(korma) korma.mds <- iso

Re: [R] NMDS QUESTION

2013-09-01 Thread arun
oMDS(korma.dist) #works #initial  value 4.736717 #iter   5 value 0.140638 #iter   5 value 0.00 #iter   5 value 0.00 #final  value 0.00 #converged A.K. ___ From: Simona Augyte To: Berend Hasselman ; smartpink...@yahoo.com Cc: r-help@r-project.org Sent: Sunda

Re: [R] NMDS QUESTION

2013-09-01 Thread Berend Hasselman
On 01-09-2013, at 15:34, Simona Augyte wrote: > Ok, thanks, that helps. > > What about running the same code on a bit of a different set of data, ex.; > korma<- read.csv(text=" > GR T C M B > 1 0 0 0 1 > 2 0 1 0 0 > 3 1 1

Re: [R] NMDS QUESTION

2013-09-01 Thread Berend Hasselman
On 01-09-2013, at 00:30, Simona Augyte wrote: > I'm trying to run a very simple non-metric multidimensional scaling code on > a 8x5 character matrix. > gr T C M B > arcor 6 4 6 5 > corfo 24 21 23 24 > corma 25 15 26 17 > crust 3 2 6 5 > fil 15 12 15 15 > fol 11 9 6 8 > leat 10 11 13 13 > seag 2

Re: [R] NMDS QUESTION

2013-08-31 Thread arun
imnames")=List of 2  # ..$ : NULL  # ..$ : chr [1:4] "T" "C" "M" "B"  coma.dist<- dist(coma.x) A.K. - Original Message - From: Simona Augyte To: r-help@r-project.org Cc: Sent: Saturday, August 31, 2013 6:30 PM Subject: [R] NMDS QUESTION

[R] NMDS QUESTION

2013-08-31 Thread Simona Augyte
I'm trying to run a very simple non-metric multidimensional scaling code on a 8x5 character matrix. gr T C M B arcor 6 4 6 5 corfo 24 21 23 24 corma 25 15 26 17 crust 3 2 6 5 fil 15 12 15 15 fol 11 9 6 8 leat 10 11 13 13 seag 2 2 2 2 My code is as follows; coma<-read.csv("coma.csv",header=TRUE) co