On Tue, 30 Mar 2010, Karl Brand wrote:
Peter, Chuck,
Big thanks for your input.
I will be following up each and every of your suggestions on the morrow.
Something of note though that you may have further thoughts on- phyper() was
*specifically* recommneded by BioC responders for my applicati
Peter, Chuck,
Big thanks for your input.
I will be following up each and every of your suggestions on the morrow.
Something of note though that you may have further thoughts on- phyper()
was *specifically* recommneded by BioC responders for my application in
spite of the fact i originally tho
Karl,
I strongly support Chuck's recommendations.
If you do still want to compute such probabilities 'by hand',
you could consider the lchoose() function which does work
for your example.
-Peter Ehlers
On 2010-03-30 9:55, Charles C. Berry wrote:
On Tue, 30 Mar 2010, Karl Brand wrote:
Dear R
On Tue, 30 Mar 2010, Karl Brand wrote:
Dear R Users,
I employed the phyper() function to estimate the likelihood that the number
of genes overlapping between 2 different lists of genes is due to chance.
This appears to work appropriately.
Now i want to try this with 3 lists of genes which p
Dear R Users,
I employed the phyper() function to estimate the likelihood that the
number of genes overlapping between 2 different lists of genes is due to
chance. This appears to work appropriately.
Now i want to try this with 3 lists of genes which phyper() does not
appear to support.
So
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