Spencer, you will find far more knowledgeable help on the Bioconductor
mailing list.
But here's a starting poing:
https://www.bioconductor.org/packages/release/workflows/html/TCGAWorkflow.html
Sarah
On Thu, Dec 13, 2018 at 8:01 AM Spencer Brackett
wrote:
>
> Good morning,
>
> I am looking for
Good morning,
I am looking for a workflow compatible with a TCGA file, and one that can
essentially identify the protein expression involved with TMZ-induced MGMT
methylation. Any advice or information that could lead me to finding such a
workflow would be greatly appreciated!
Best,
Spencer Br
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