Re: [R] GSEA package error

2012-11-29 Thread Pascal Oettli
Hello, For clarification, is it 'GSEA' or 'GSCA' package? And from where did you get it? Regards, Pascal Le 29/11/2012 07:59, Seb a écrit : Dear R gurus I’m trying to use the GSCA package to a series of microarray data (prostate cancer normal vs tumor (29 vs 29 paired)) but I’m running into

[R] GSEA package error

2012-11-28 Thread Seb
Dear R gurus I’m trying to use the GSCA package to a series of microarray data (prostate cancer normal vs tumor (29 vs 29 paired)) but I’m running into some problems. I have a matrix (named /data_final/) with 11k rows(genes) and 60 cols (58 samples (29N vs 29T), GO IDs, KEGG IDs). I also have a