o.com
>
>
>> -Original Message-
>> From: jgrn...@gmail.com [mailto:jgrn...@gmail.com] On Behalf Of Jonathan
>> Greenberg
>> Sent: Saturday, September 28, 2013 10:51 AM
>> To: William Dunlap
>> Cc: r-help
>> Subject: Re: [R] Error: C stack usage is
ORTANT_2
> > find: File system loop detected; `dir/subdir/linkToUpperDir' is part of the
> > same file
> system loop as `dir'.
> > dir/IMPORTANT_1
> >
> > Bill Dunlap
> > Spotfire, TIBCO Software
> > wdunlap tibco.com
> >
> >
> &g
On 28-09-2013, at 19:51, Jonathan Greenberg wrote:
> Thanks all -- ok, so the symbolic link issue is a distinct
> possibility, but fundamentally doesn't solve the issue since most
> users will have symbolic links on their machines SOMEPLACE, so a full
> drive scan will run into these issues --
gt; perDir/subdir/linkToUpperDir/subdir/linkToUpperDir/subdir/linkToUpperDir/subdir/linkTo
>> UpperDir/subdir/linkToUpperDir/subdir/linkToUpperDir/subdir/linkToUpperDir/subdir/lin
>> kToUpperDir/subdir/linkToUpperDir/subdir/linkToUpperDir"
>> > system("find dir")
>> dir
&g
o:r-help-boun...@r-project.org] On
> Behalf
> Of William Dunlap
> Sent: Friday, September 27, 2013 12:56 PM
> To: Jonathan Greenberg; r-help
> Subject: Re: [R] Error: C stack usage is too close to the limit when using
> list.files()
>
> Do you have some symbolic links that make l
On 27-09-2013, at 21:50, Jonathan Greenberg wrote:
> Ben:
>
> I'd like to avoid using that (previous version of my code solved it in
> that way) -- I would like cross-platform compatibility and I am pretty
> sure, along with Windows, vanilla Macs don't come with "find" either
> unless XCode has
Behalf
> Of Jonathan Greenberg
> Sent: Friday, September 27, 2013 12:13 PM
> To: r-help
> Subject: [R] Error: C stack usage is too close to the limit when using
> list.files()
>
> R-helpers:
>
> I'm running a file search on my entire drive (Mac OS X) using:
>
>
Ben:
I'd like to avoid using that (previous version of my code solved it in
that way) -- I would like cross-platform compatibility and I am pretty
sure, along with Windows, vanilla Macs don't come with "find" either
unless XCode has been installed.
Is the list.files() code itself recursive when u
Jonathan Greenberg illinois.edu> writes:
>
> R-helpers:
>
> I'm running a file search on my entire drive (Mac OS X) using:
>
> files_found <-
list.files(dir="/",pattern=somepattern,recursive=TRUE,full.names=TRUE)
> where somepattern is a search pattern (which I have confirmed via a
> unix "fin
R-helpers:
I'm running a file search on my entire drive (Mac OS X) using:
files_found <-
list.files(dir="/",pattern=somepattern,recursive=TRUE,full.names=TRUE)
where somepattern is a search pattern (which I have confirmed via a
unix "find / -name somepattern" only returns ~ 3 results).
I keep g
> -Original Message-
> From: r-help-boun...@r-project.org
> [mailto:r-help-boun...@r-project.org] On Behalf Of Luis Ridao Cruz
> Sent: Monday, September 14, 2009 6:24 AM
> To: R-help
> Subject: [R] Error: C stack usage is too close to the limit
>
> R-help,
>
R-help,
I 'm trying to optimize a model to data using log-likelihoods
but I encounter the following error message:
> l= c(49.4, 57.7,64.8,70.9,78.7,86.6,88.3,91.6,99,115)
> t=3:12
> fn <- function(params, l=l, t=t) {
Linf <- params[1]
k <- params[2]
I can't find any file called Rinterface.h on my computer. What folder is it
supposed to be in?
>you can find the R_CStackLimit in Rinterface.h
>after that you will know how to use it!
>>Apparently the way to deal with this error message is to set
>> R_CStackLimit = (uintptr_t)-1
>>I tried typin
you can find the R_CStackLimit in Rinterface.h
after that you will know how to use it!
ÔÚ2009-05-21?17:53:54£¬anon36??дµÀ£º
>
>Apparently?the?way?to?deal?with?this?error?message?is?to?set
>??R_CStackLimit?=?(uintptr_t)-1
>I?tried?typing?this?in?the?R?console,?but?it?says?Error:?object
>"R_CStac
Apparently the way to deal with this error message is to set
R_CStackLimit = (uintptr_t)-1
I tried typing this in the R console, but it says Error: object
"R_CStackLimit" not found.
So where do I type it? In one of the initialization files that R uses when
it starts up?
I can't find the answer a
Hi,
I encountered an error of type 'C stack usage is too close to the limit', and
could not find information so far to get unstuck. The error occurs when
subsetting columns from a data frame (see stack trace below). However if I
step through the sequence of code found in the 'topmost' function
Hi,
I encountered an error of type 'C stack usage is too close to the limit', and
could not find information so far to get unstuck. The error occurs when
subsetting columns from a data frame (see stack trace below). However if I
step through the sequence of code found in the 'topmost' function
Hello,
Does anyone know in general what causes the following error:
Error: C stack usage is too close to the limit
I rewrote some R code that worked fine to be more streamlined, and now I
get this error. I don't really know where to start to fix the problem.
Thanks,
John
__
Sorry, indeed I forgot to put some of the factors in the code. Here it
is again, now updated:
calcurve <- cbind(1:2e4, 1:2e4, rep(100, length=2e4));
caldist <- function(cage, error, sdev=2, times=5, By=1)
{
calcurve <- calcurve[which((calcurve[,2]+calcurve[,3]) >=
cage-(times*error)),];
Your function has 4 parameters and you are only calling with two. The
first statement:
caldist <- function(cage=Cage, error=Error, sdev=Sdev, times=Times, By=By)
{
theta <- seq(min(calcurve[,1]), max(calcurve[,1]), by=By);
use "By" which is not defined.
On Jan 26, 2008 4:29 PM, Maarten Blaau
Lately R has been behaving strange on my Linux (Ubuntu 7.10) machine,
with occasional segfaults. Today something else and reproducible
happened:
If I type the code below (meant for calibrating data), I get the error
message that "the C stack usage is too close to the limit".
calcurve <- cbi
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