Re: [R] Derivative of expm function

2014-04-24 Thread Martin Maechler
> Wagner Bonat > on Wed, 23 Apr 2014 12:12:17 +0200 writes: > Hi all ! > I am look for some efficient method to compute the derivative of > exponential matrix function in R. For example, I have a simple matrix like > log.Sigma <- matrix(c(par1, rho, rho, par2),2,2)

[R] Derivative of expm function

2014-04-23 Thread Wagner Bonat
Hi all ! I am look for some efficient method to compute the derivative of exponential matrix function in R. For example, I have a simple matrix like log.Sigma <- matrix(c(par1, rho, rho, par2),2,2) require(Matrix) Sigma <- expm(log.Sigma) I want some method to compute the derivatives of Sigma

Re: [R] Derivative of a function

2011-06-29 Thread S Ellison
...@gmail.com] Sent: 29 June 2011 21:35 To: r-help@r-project.org Subject: Re: [R] Derivative of a function Yes. I need to do implicit differentiation. After rearrangement, I got (x2 – x1) * b = log(1 / y - 1) Take derivative of both sides with respect to y, I have (x2 – x1) * b’[y] = - 1/y(1-y) Since both

Re: [R] Derivative of a function

2011-06-29 Thread Gabor Grothendieck
On Wed, Jun 29, 2011 at 4:35 PM, Lisa wrote: > Yes. I need to do implicit differentiation. After rearrangement, I got > > (x2 – x1) * b = log(1 / y - 1) > > Take derivative of both sides with respect to y, I have > > (x2 – x1) * b’[y] = - 1/y(1-y) > > Since both (x2 – x1) and b’[y] are vectors, I

Re: [R] Derivative of a function

2011-06-29 Thread Lisa
Yes. I need to do implicit differentiation. After rearrangement, I got (x2 – x1) * b = log(1 / y - 1) Take derivative of both sides with respect to y, I have (x2 – x1) * b’[y] = - 1/y(1-y) Since both (x2 – x1) and b’[y] are vectors, I cannot move (x2 – x1) to RHS. This is why I posted my quest

Re: [R] Derivative of a function

2011-06-29 Thread Rolf Turner
On 30/06/11 06:16, Gabor Grothendieck wrote: On Tue, Jun 28, 2011 at 10:03 PM, Lisa wrote: Dear all, I just want to get the derivative of a function that looks like: y = exp(x1*b) / (exp(x1*b) + exp(x2*b)) where y is a scalar, x1, x2, and b are vectors. I am going to take the derivative of b

Re: [R] Derivative of a function

2011-06-29 Thread Gabor Grothendieck
On Tue, Jun 28, 2011 at 10:03 PM, Lisa wrote: > Dear all, > > I just want to get the derivative of a function that looks like: > > y = exp(x1*b) / (exp(x1*b) + exp(x2*b)) > > where y is a scalar, x1, x2, and b are vectors. I am going to take the > derivative of b with respect to y, but I cannot de

Re: [R] Derivative of a function

2011-06-29 Thread David Winsemius
On Jun 29, 2011, at 10:48 AM, Lisa wrote: This is not a homework. I just want to see if there are some R functions or some ideas I can borrow to solve my problem. There is a deriv function that provides limited support for symbolic differentiation. The Rhelp list is advertised ( http://

Re: [R] Derivative of a function

2011-06-29 Thread Lisa
This is not a homework. I just want to see if there are some R functions or some ideas I can borrow to solve my problem. -- View this message in context: http://r.789695.n4.nabble.com/Derivative-of-a-function-tp3631814p3633071.html Sent from the R help mailing list archive at Nabble.com. __

Re: [R] Derivative of a function

2011-06-28 Thread Rolf Turner
(1) You really ought to do your own homework. (2) What has this to do with R? cheers, Rolf Turner On 29/06/11 14:03, Lisa wrote: Dear all, I just want to get the derivative of a function that looks like: y = exp(x1*b) / (exp(x1*b) + exp(x2*b)) where y is a scalar, x1, x2, and

[R] Derivative of a function

2011-06-28 Thread Lisa
Dear all, I just want to get the derivative of a function that looks like: y = exp(x1*b) / (exp(x1*b) + exp(x2*b)) where y is a scalar, x1, x2, and b are vectors. I am going to take the derivative of b with respect to y, but I cannot derive an expression in which b is function of y. I know there

Re: [R] Derivative

2010-08-11 Thread TGS
This following works for me but I still favor the quick and dirty method suggested originally by David. options(scipen = 10) x <- seq(0,2, by = .01) f <- expression(5*cos(2*x)-2*x*sin(2*x)) D(f, 'x') f.prime <- function(x){ -(5 * (sin(2 * x) * 2) + (2 * sin(2 * x) + 2 * x * (cos(2 * x) *

Re: [R] Derivative

2010-08-11 Thread David Winsemius
On Aug 12, 2010, at 12:49 AM, Dennis Murphy wrote: Hi: Try the following: f <- function(x) 5*cos(2*x)-2*x*sin(2*x) curve(f, -5, 5) abline(0, 0, lty = 'dotted') This shows rather clearly that your function has multiple roots, which isn't surprising given that it's a linear combination of si

Re: [R] Derivative

2010-08-11 Thread Dennis Murphy
Hi: Try the following: f <- function(x) 5*cos(2*x)-2*x*sin(2*x) curve(f, -5, 5) abline(0, 0, lty = 'dotted') This shows rather clearly that your function has multiple roots, which isn't surprising given that it's a linear combination of sines and cosines. To find a specific root numerically, use

Re: [R] Derivative

2010-08-11 Thread David Winsemius
On Aug 11, 2010, at 9:21 PM, TGS wrote: How would I numerically find the x value where the derivative of the function below is zero? x <- seq(1,2, by = .01) y <- 5*cos(2*x)-2*x*sin(2*x) plot(x,abs(y), type = "l", ylab = "|y|") Two ideas: ---minimize abs(diff(y)) abline(v=x[which.min(abs(

[R] Derivative

2010-08-11 Thread TGS
How would I numerically find the x value where the derivative of the function below is zero? x <- seq(1,2, by = .01) y <- 5*cos(2*x)-2*x*sin(2*x) plot(x,abs(y), type = "l", ylab = "|y|") __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman

Re: [R] Derivative of the probit

2010-05-06 Thread Ted Harding
On 06-May-10 20:40:30, Andrew Redd wrote: > Is there a function to compute the derivative of the probit (qnorm) > function > in R, or in any of the packages? > > Thanks, > -Andrew I don't think so (though stand to be corrected). However, it would be straightforward to write one. For simplicity o

Re: [R] Derivative of the probit

2010-05-06 Thread Thomas Stewart
f<-function(x) 1/dnorm(qnorm(x)) for x in (0,1) -tgs On Thu, May 6, 2010 at 4:40 PM, Andrew Redd wrote: > Is there a function to compute the derivative of the probit (qnorm) > function > in R, or in any of the packages? > > Thanks, > -Andrew > >[[alternative HTML version deleted]] > > _

[R] Derivative of the probit

2010-05-06 Thread Andrew Redd
Is there a function to compute the derivative of the probit (qnorm) function in R, or in any of the packages? Thanks, -Andrew [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help

Re: [R] Derivative of a smooth function

2010-04-04 Thread Julien Gagneur
Hi Fir, you can alternatively use local regression, implemented in the package locfit, which can also estimate derivatives: library(locfit) attach(cars) # main fit fit <- locfit( dist ~ speed ) # fit 1st derivative fitd <- locfit( dist ~ speed , deriv =1) # plots... plot(speed, dist ) lines(fit)

Re: [R] Derivative of a smooth function

2010-04-03 Thread Chidambaram Annamalai
While this doesn't answer your question, I want to let you know that there is a proposal for a related improvement within R that will let users compute (numerically) the derivatives, of any order, of a given function inside of R. In your case, this means that you will write the smooth spline functi

Re: [R] Derivative of a smooth function

2010-04-02 Thread Ravi Varadhan
stant Professor, Division of Geriatric Medicine and Gerontology School of Medicine Johns Hopkins University Ph. (410) 502-2619 email: rvarad...@jhmi.edu - Original Message - From: FMH Date: Friday, April 2, 2010 4:39 am Subject: [R] Derivative of a smooth function To: r-help@r-project.org

[R] Derivative of a smooth function

2010-04-02 Thread FMH
Dear All, I've been searching for appropriate codes to compute the rate of change and the curvature of  nonparametric regression model whish was denoted by a smooth function but unfortunately don't manage to do it. I presume that such characteristics from a smooth curve can be determined by th

Re: [R] Derivative of nonparametric curve

2009-09-14 Thread FMH
Thank you - Original Message From: spencerg To: "Liaw, Andy" Cc: Rolf Turner ; FMH ; r-help@r-project.org Sent: Wednesday, September 9, 2009 3:08:43 PM Subject: Re: [R] Derivative of nonparametric curve     This may be overkill for your application, but you might be int

Re: [R] Derivative of nonparametric curve

2009-09-09 Thread spencerg
This may be overkill for your application, but you might be interested in the "fda" package, for which a new book appeared a couple of months ago: "Functional Data Analysis with R and Matlab" (Springer Use R! series, by Ramsay, Hooker and Graves; I'm the third author). The package inclu

Re: [R] Derivative of nonparametric curve

2009-09-09 Thread Liaw, Andy
From: Rolf Turner > > On 8/09/2009, at 9:07 PM, FMH wrote: > > > Dear All, > > > > I'm looking for a way on computing the derivative of first and > > second order of a smoothing curve produced by a nonprametric > > regression. For instance, if we run the R script below, a smooth > > nonpara

Re: [R] Derivative of nonparametric curve

2009-09-08 Thread Rolf Turner
On 8/09/2009, at 9:07 PM, FMH wrote: Dear All, I'm looking for a way on computing the derivative of first and second order of a smoothing curve produced by a nonprametric regression. For instance, if we run the R script below, a smooth nonparametric regression curve is produced. provid

[R] Derivative of nonparametric curve

2009-09-08 Thread FMH
Dear All, I'm looking for a way on computing the derivative of first and second order of a smoothing curve produced by a nonprametric regression. For instance, if we run the R script below, a smooth nonparametric regression curve is produced. provide.data(trawl) Zone92   <- (Year == 0 & Zone =