h individual and the j-th variant would become d_ij
>>> new=2-dij.
>>> Dosage [j,]=2-dosage[j,]
>>> My desire data frame looks like
>>> Dataframe new
>>> SNPID" "OA" "EA" id1 id2 id3 id4 id5
>&
;"G" "A" 2- 1.02 2- 2
>> 2-1
>> 2-2 2- 2
>> "snp003""C" "A" 11.03
>> 2
>> 0 1
>>
ot;"C" "T" 1 0
1.01 11
can you help me the r code for the above.
Kind regards,
Hana
On 6/12/22, hanatezera wrote:
Dear Jim, Thanks a lot this is exactly i am looking for.S
uot;A" 2-1.02 2-1.99
> 2-2 2-1.02 2-1.98
> "snp005""C" "T" 10
> 1.01 11
> can you help me the r co
.
> For instance i am looking the data
> mydf
> IDnumber OA EA beta
> 11 A C 0.050
> 22 G A 0.098
> 33 T G 0.789
>
> Best,
> Hana
>
>
>
> Original message
> From: Jim Lemon
> Date: 6/12/22 1:59 AM (GMT+03:
Date:
6/12/22 1:59 AM (GMT+03:00) To: hanatezera , r-help
mailing list Subject: Re: [R] Changing sign of columns
and values Hi Hana,I think this is what you want:# first read in your
examplemydf<-read.table(text="IDnumber OA EA beta1 C A -0.052
G A
Hi Hana,
I think this is what you want:
# first read in your example
mydf<-read.table(text=
"IDnumber OA EA beta
1 C A -0.05
2 GA0.098
3 GT-0.789",
header=TRUE,stringsAsFactors=FALSE)
# check it
mydf
IDnumber OA EA beta
11 C A -0.05
This is a plain text list. Your html post got mangled (see below). You
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-
I have the following data set in data frameIDnumber OA EA beta1
C A -0.052 G A
0.0983 G T -0.789I want to change
the sign of negative beta. If the negative value change to post
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