Re: [R] Cannot update R

2010-11-24 Thread alon.benari
Thanks Phil, I may not be as versed in UNIX as you. Can I ask you to show me the BASH command sequence. I did find the original package, I must have downloaded it mannualy. But I do not know where I installed it, how can I find that? Thanks Alon -- View this message in context: http://r.7

Re: [R] Cannot update R

2010-11-24 Thread alon.benari
Thank you Josh Updating, you suggest I do it through the GUI of the package manager? unless you know how to do it from the the command line I tried to get rid of rjags but it still says it cannot find it, How do I locate the library? Thanks Alon -- View this message in context: http://r.78

Re: [R] Cannot update R

2010-11-24 Thread Joshua Wiley
Two comments: http://www.r-project.org/nosvn/R.check/r-release-linux-ix86/rjags-00check.html CRAN checks show rjags is having errors (maybe because of the library issue, I'm not certain) You are using an old unstable version of 2.12.0---the stable release has come out since. It might be worth u

Re: [R] Cannot update R

2010-11-24 Thread Phil Spector
Alon - It says it couldn't find it in /usr/local/lib -- is it in some non-standard location? If so, you could modify the ~/.R/Makevars file to contain PKG_LIBS=/location/of/jagslibrary before trying to build the package. - Phil On Wed, 24 Nov 2

Re: [R] Cannot update R

2010-11-24 Thread alon.benari
Thanks Phil, To complicate matters still let me add that I have been using JAGS and rjags for a while, never had a problem , so R can find JAGS and I can interface with JAGS using rjags... but I cannot update it? Your opinion? Maybe I need to update a path to rjags? maybe I can move it to the m

Re: [R] Cannot update R

2010-11-24 Thread Phil Spector
I believe R is complaining that it can't find the jags library. You can find out about it here: http://www-fis.iarc.fr/~martyn/software/jags/ There appear to be rpms available. - Phil Spector Statistical Computi

[R] Cannot update R

2010-11-24 Thread alon.benari
Hello I cannot update the package rjags. Although I am a su. Running openSUSE R version : language R version.string R version 2.12.0 Under development (unstable) (20