Re: [R] Can't use attributes from gml file in Cytoscape

2011-04-15 Thread Gábor Csárdi
Hi, the problem is that igraph puts node colors into the GML file as simple vertex attributes, but this is not what Cytoscape expects. Plus, it seems that Cytoscape does not read all the node/edge attributes from the GML file, only the ones it interprets, so the color information is lost. Sadly,

[R] Can't use attributes from gml file in Cytoscape

2011-04-15 Thread Sandeep Amberkar
Hello, I am exporting a graph in "gml" format from igraph 0.5.5. When I open the file in Cytoscape v.2.7 I can't map the color attribute that I assign to the graph when I export it from igraph. Could anyone help me in this? Thanks. -- Warm Regards, Sandeep Amberkar BioQuant,BQ26, Im Neuenheimer