If different labs tested different tissue.types, I am not sure you can
effectively partition variance between labs(batches) and tissue.types.
Weidong Gu
On Tue, Sep 20, 2011 at 2:14 PM, karena wrote:
> Hi,
>
> I am doing an analysis to see if these is tissue specific effects on the
> gene expres
Hi,
I am doing an analysis to see if these is tissue specific effects on the
gene expression data .
Our data were collected from 6 different labs (batch effects). lab 1 has
tissue type 1 and tissue type 2, lab 2 has tissue 3, 4,5,6. The other labs
has one tissue type each. The 'sample' data is as
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