Re: [R] CCA with Vegan - Plot problem

2012-11-09 Thread rumble14
Sorry, just to clarify as I have put .S files in the later response but .csv in the earlier, I have tried with both, changing to read.csv or read.table as appropriate but get the same play of events. H -- View this message in context: http://r.789695.n4.nabble.com/CCA-with-Vegan-Plot-problem-tp

Re: [R] CCA with Vegan - Plot problem

2012-11-09 Thread rumble14
Thanks for replying. Apologies for not putting the code, I have not deviated from that used on the website I linked to. >Can you show the exact code you used please? I am using: #below is Species_1 etc org <- read.table ("Organisms.S", header=TRUE, row.names=1) #below is environmental variables

[R] CCA with Vegan - Plot problem

2012-11-09 Thread rumble14
Hi, I've just started using R and am having some problems with CCA using vegan. I'm looking at abundance p/m2 (hence decimals) vs environmental variables and have been using http://ecology.msu.montana.edu/labdsv/R/labs/lab12/lab12.html to guide me through. My organism data looks like this: Sample