new script and try to reopen it, the same thing happens
again.
*Dr. Oliver Balmer*
Project leader
Tel. +41 (0)61 284 87 48
oliver.bal...@swisstph.ch
*Swiss Tropical and Public Health Institute*
Socinstrasse 57, 4051 Basel, Switzerland
www.swisstph.ch
[[alternative HTML version dele
org/web/packages/MDPtoolbox/index.html
Other than reading the papers I have no practical experience applying
that package.
Hope that helps.
--
Oliver Dechant
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Interesting! The odd thing is it works perfectly well on Linux
platforms, at least - I guess it must be something to do with the Mac
locales. Thanks!
On Sun, May 7, 2017 at 1:51 PM, peter dalgaard wrote:
>
>> On 7 May 2017, at 08:36 , Oliver Keyes wrote:
>>
>> Hey all,
for the
character. But this only appears in R - Python has it display
perfectly - so I'm kind of at a loss. Does anyone know what's going
on?
Best,
Oliver
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e between being unintentionally rude, but helpful
>> and purposely putting someone down. -- H
>
>
> I'm afraid I don't think your point is relevant. I didn't claim all the
> people who were rude did it unintentionally. However, I don't know anyone
> on the l
gt;> >> helpfully, can see their solutions accepted or not, or commented on in
>> >> that
>> >> specific topic.
>> >>
>> >> Perhaps one solution would be to create a new "R-not-help" list where,
>> >> as in
>> >>
t.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more
2007-11-25T17:18:01 2007-11-25T17:19:11 mkolker mkolker NA
> Nicely performedNA NA
>
> Could somebody please help me in how could I get the required output
>
> I have posted the same question in Stackoverflow and the link is here (it
> might help in giving more
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> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
Oliver Ke
deleted]]
>>
>> __
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>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> and
% will be my quotations and references but that's normal,
Thanks again, I will be sharing your thoughts with my thesis supervisor.
Cheers,
Oliver
From: Marc Schwartz
Sent: 22 September 2015 22:27
To: peter dalgaard
Cc: Bert Gunter; BARRETT, Oliver; R
f you could provide my with some clarity as to why
this output from 'R' is reading as plagiarism.
I would like to thank you in advance,
Kind regards,
Oliver Barrett
(+44) 7341 834 217
[[alternative HTML version deleted]]
__
R
read as including nuls, despite having different values? And how would I go
about removing said nuls?
--
Oliver Keyes
Research Analyst
Wikimedia Foundation
[[alternative HTML version deleted]]
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So, with R you use object[int,int] to select the rows and columns you want
to highlight. ([rows,columns]); what you've done here is asked it to apply
to rows 1 to 2 (1:2), across all columns. You'll want [,3:4] to specify two
particular columns. I'm not familiar enough with glm itself to provide an
Total newb here, but you might want to check out ?grep and ?regmatches as a
start. (ways to match and then extract substrings respectively)
On Mon, Jan 14, 2013 at 9:30 AM, Sachinthaka Abeywardana <
sachin.abeyward...@gmail.com> wrote:
> Hi all,
>
> Suppose I have a data frame with mixed content
link.txt', reason 'The system cannot find
the file specified'
No link is created. The 'link.txt' to 'link.txt' is suspicious. Does
this happen to anybody else? I didn't find anything in my searches.
Oliver
__
R-h
sorry, I forgot: I'm using gcc and gfortran, version 4.5.4.
Oliver
On Mon, Oct 08, 2012 at 09:57:00AM +0100, Oliver Kullmann wrote:
> Hello,
>
> I'm trying to install R on two Linux machines:
>
> 1.
> > uname -a
> Linux cs-wsok 3.4.6-2.10-desktop #1 SMP PREE
ry
`/home/kullmann/OKplatform/ExternalSources/builds/R/R-2.15.1/tests'
make[3]: *** [test-Reg] Error 2
I looked at
http://www.stats.bris.ac.uk/R/doc/FAQ/R-FAQ.html#R-Bugs
and didn't find specific suggestions about information to provide in
case of buildin
Hello,
Can't you just use vectors? Untested example:
var[1] <- 10
var[2] <- 20
y <- 1
while(y < 3) {
print(var[y])
y <- y+1
}
Take care
Oliver
On Wed, Jun 27, 2012 at 8:22 PM, kat_the_great wrote:
> Dear R Users:
>
> I'm a S
Hello,
My guess would be that solve() does not take advantage of the
special structure of the matrix and that you may want a sparse matrix
representation.
Take care
Oliver
On Tue, Jun 26, 2012 at 1:56 PM, Paul Rathouz wrote:
> Hi -- I am wondering why the time to solve (inv
is likely to request them next. But in any case, input
form disk or network is almost certain to cause waiting times and
therefore decreases used CPU time.
Take care
Oliver
On Tue, Jun 26, 2012 at 1:53 PM, Christofer Bogaso
wrote:
> On 26-06-2012 16:33, Oliver Ruebenacker wrote:
>
care
Oliver
On Mon, Jun 25, 2012 at 8:07 PM, Xi wrote:
> Dear All,
>
> I have been searching online for help increasing my R code more efficiently
> for almost a whole day, however, there is no solution to my case. So if
> anyone could give any clue to solve my problem, I woul
;solutions" that aren't
solutions (e.g. trying to invert a singular matrix)
(7) Some well-defined problems may defy a straight-forward approach
(e.g. solving stiff differential equations)
Take care
Oliver
On Sun, Jun 24, 2012 at 5:29 PM, Sarah Goslee wrote:
> Please read R
Hello Brett,
My guess is you did not set the access rules on the MySQL server to
allow connections from this host.
Take care
Oliver
On Thu, Jun 21, 2012 at 1:29 PM, Prof Brian Ripley
wrote:
> On 21/06/2012 17:17, Brett Robinson wrote:
>>
>> Hi, I have tried to
Hello,
For an optimization strategy, we need to know more: do you have many
variables? do you have many different formulae? do you re-calculate
after changing only one variable?
Take care
Oliver
On Tue, Jun 19, 2012 at 11:10 PM, Nick Matzke wrote:
> Hi all,
>
> This
Hello,
By RNI, do you mean the Microsoft Raw Native Interface or the
Rengine R Native Interface?
Take care
Oliver
On Fri, Jun 15, 2012 at 12:03 PM, wrote:
> Hello,
>
> first of all thanks to both of you for your fast response.
> Going back to Michael's wo
n open multiple independent
R sessions on the same system and then address them separately via JNI
(I don't know, but I would assume you can do that without multiplying
the installation).
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomi
nut
bee fond because they happen to leed two sentence consisting of reel
word")
It is therefore doubtful that spell-correction can be done non-interactively.
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomics.com/wiki/Oliver_Ruebenacker)
K
t the dim attribute (but I didn't test that).
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomics.com/wiki/Oliver_Ruebenacker)
Knowomics, The Bioinformatics Network (http://www.knowomics.com)
SBPAX: Turning Bio
Hello,
On Tue, Jun 12, 2012 at 11:13 AM, R. Michael Weylandt
wrote:
> Long answer: use a closure if for some bizarre reason you just can't
> use a loop.
Do you mean use recursion?
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomi
ve an urgent requirement.
Can you explain why you want a goto? You may be aware that opinions
in the computer science community on goto range from "never use" to
"use very sparingly".
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.kn
the data, but use
some sort of sparse matrix implementation.
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomics.com/wiki/Oliver_Ruebenacker)
Knowomics, The Bioinformatics Network (http://www.knowomics.com)
SBPAX: Turning Bio Know
uot;, "Ljava/io/PrintStream", "out")
Error in .jfield("java/lang/System", "Ljava/io/PrintStream", "out") :
RgetField: field out not found
Thanks!
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.k
Oliver
On Fri, Jun 1, 2012 at 11:29 AM, Hengstberger Florian
wrote:
> I noticed that nls treats weights as relative and that the absolute size of
> the weights w in
> the following script has therefore no influence on the errors of the
> parameters reported in the summary
>
Hello James,
Thanks for the pointer, but Rredland is not maintained any more.
Take care
Oliver
On Thu, May 31, 2012 at 8:21 PM, J Toll wrote:
> On Thu, May 31, 2012 at 6:40 AM, Oliver Ruebenacker wrote:
>> Hello,
>>
>> Is there a convenient way t
scope or have them read only arguments and local variables (i.e. pass
all needed input variables as arguments).
Take care
Oliver
On Thu, May 31, 2012 at 5:25 PM, Saptarshi Guha
wrote:
> Hello,
> (Sorry for the repost, i am resending in plain text)
>
> I have a function '
your
purpose. Exploit symmetries by keeping distance weights equal that
should be equal due to symmetry.
You can run an optimization algorithm by using an evaluation
function that is minimal for equal areas.
Hope this helps!
Take care
Oliver
On Thu, May 31, 2012 at 11:23 AM, AMFTom
a
and OpenRDF Sesame Rio that could query RDF/OWL data and turn the
results into data frames.
Thanks!
Take care
Oliver
--
Oliver Ruebenacker
Bioinformatics Consultant (http://www.knowomics.com/wiki/Oliver_Ruebenacker)
Knowomics, The Bioinformatics Network (http://www.knowomics.com)
wiley.ps...@gmail.com]
Sent: Wednesday, 2 November 2011 8:34 p.m.
To: Oliver Mannion (COMPASS)
Cc: r-help@r-project.org
Subject: Re: [R] Removing or ignoring package version for generic function in
locked environment
Interesting. I have a few (untested) thoughts. Before I get into those
th
d that group of codes as-it-is in many places?
[...]
You did not asked for it, you may know it, or may not know it:
if you use apply functions and other vector oriented functions,
this can bring you a huge speedup, compared to a for-loop.
Ciao,
Oliver
gregate.numeric, pos = which(search() == "package:epicalc")) :
cannot remove bindings from a locked environment
Is there some way I can remove aggregate.numeric, or otherwise prevent it from
being used?
Thanks in advance,
Oliver
__
R-h
Hey Guys,
I just started fooling around with the twitteR package in order to get a record
of all tweets from a single public account. When I run userTimeline, I get the
default 20 most recent tweets just fine. However, when I specify an arbitrary
number of tweets (as described in the documentat
in the first line in the file with name f:
lengthfirstline = function(f) {
length(unlist(strsplit(trim(readLines(f,1)), " ")))
}
Oliver
On Sun, Aug 28, 2011 at 07:23:07AM -0700, Joshua Wiley wrote:
> Hi Oliver,
>
> Look at ?readLines
>
> I imagine something like:
fails, and try the second one. However tryCatch doesn't
seem to make it simple to write something like
E = try(expr1 otherwise expr2)
(if expr1 fails, evaluate expr2 instead) ?
Oliver
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ficients, signif.legend=FALSE)
digits = max(3,getOption("digits")-3)
cat("R-squared:", formatC(S$r.squared, digits = digits), "\n")
}
Thanks!
Oliver
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n "short_sum_lm",
but couldn't find the parts I'm interested in.
I hope it's not too complicated to achieve that.
(In general it would be great to have more influence
on the summary-function -- typically it's too spacious.)
Thanks for your attention
Oliver
Hi
A client of mine has asked me to investigate the installation of R-software.
Could anyone tell me whether the software works only on a client machine or
whether it sits on a server with clients attaching to it?
Not immediately clear from the docs.
Best
Oliver
--
Oliver
On Thu, Jun 09, 2011 at 01:50:17PM +0200, Uwe Ligges wrote:
>
>
> On 09.06.2011 13:37, oliver wrote:
> >On Thu, Jun 09, 2011 at 11:22:54AM +0200, Uwe Ligges wrote:
> >>Well,
> >>
> >>persp(x, y, z) does exactly what you asked for: it plots tha matrix
>
is the other way around.
I don't want to calc the z for my x-and y, I want to generate the x-
and y- values for my matrix of z-values.
Ciao,
Oliver
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PLEASE do
mathcing how I think).
Isn't that a very common case, where my z_x_y = mydata[x,y] ?
Maybe I just don't know the right function that helps me.
Any idea about that?
Ciao,
Oliver
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ng it in a loop.
Can this be used for efficiency reasons in general?
What do these macros do?
Do they convert data or cast datatypes?
Ciao,
Oliver
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PLEASE do read the pos
Oliver first.in-berlin.de> writes:
[...]
> Can you give a simple C-Code example / snippet,
> so that I can see what I would need to do, when trying to
> do that on the C-side?
h 5.9.5: classes...
I assume, that from C-side the effect is then working as expect
Oliver first.in-berlin.de> writes:
[...]
> Can you give a simple C-Code example / snippet,
> so that I can see what I would need to do, when trying
> to do that on the C-side?
...hmhh maybe with attributes, as mentioned in section 5.9.4
___
Duncan Murdoch gmail.com> writes:
>
> On 11-05-31 1:55 PM, Oliver wrote:
[...]
> >
> > Maybe someone can explain me the problem in other words?
> >
> > What does coercion in R do, and what does coercion in C (not) do?
> >
> > (And what would
about decomposition.
Ciao,
Oliver
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained
calling R code."
( Writing R Extensions, 2011-04-13, page 100 )
What is meant by this?
Maybe someone can explain me the problem in other words?
What does coercion in R do, and what does coercion in C (not) do?
(And what would be needed in C to get the same effect as in R?)
football-ball, or would it look like a triangle?) ;)
The world maybe would have been imploded.
And maybe because this would happen, the law was never activated...
...just because of Anthropic principle, which saved our world from that. ;)
Ciao,
Oliver
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained,
to the first two lines of your solutions
df<-data.frame(id=c(1:20),name=c('a','b','b','c','a','d','b','e',
'd','d','c','a','b','a','a','b','f','b','c','g'))
freq <- ave(rep(1, times=nrow(df)), df$name, FUN=sum)
I would add:
df[ sort.list(freq), ]
__
ge R
version.string R version 2.10.1 (2009-12-14)
==
Is this problem fixed in newer releases?
Or if not: how can I inform the R developers, so that they can
pick it up?
(Some R developers might be on this list?!)
Ci
Hello,
can I get somehow the pure structure without any details
via str or other functions?
I have a very large list with lists as elements...
And now I want to know which structure I have, becaiuse I need to kick out some
entries.
Any idea?
Oliver
with how to go on.
Ciao,
Oliver
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible
, and things seem to work fine with R
2.12.1 on a 32-bit XP machine. Can anybody else confirm what I'm
seeing here?
Oliver
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PLEASE do read the posting guide http://www.R-
own)
one first wants to know where obvious errors are.
Thanks!
Once I know more (we are in the middle of it) I move to
the devel-list.
Oliver
P.S. Currently it seems that the Gcc-build is not correct (still the same with
4.4.5),
not propagating linker-information to the building of libraries
svn rev51801
language R
version.string R version 2.11.0 (2010-04-22)
Thanks for you help in any case!
Oliver
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tions at different points?
Many thanks!
/Oliver
On Wed, Nov 10, 2010 at 8:21 PM, Joshua Wiley wrote:
> Hi Oliver,
>
> As a warning, I may be missing something too. I did not see something
> explicit in base R or MASS. In a quick scan of the fourth edition of
> the MASS book, I d
I was wondering if there is an equally simple way to get
the standardized/studentized residuals for a loess model? BTW
my apologies if there is something here that I'm missing.
All the best,
*
*
*Oliver *
[[alternative HTML version deleted]]
__
l/proddocs/en-us/cmd.mspx?mfr=true
In my case I can use system. The only workaround I could think of for
executing a command that requires a shell (e.g., using redirection) is
to create a temporary batch file and cmd that, which is a bit ugly.
Again, thanks for all the input.
Oliver
On Tue, S
\\path\\to\\test.R has no spaces, and I remove
the surrounding quotes, things work as expected.
I think this might be related to some earlier e-mail traffic that I
didn't see a satisfactory resolution to.
Cheers,
Oliver
__
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experimenting with connecting ImageJ and R, but
> even without connection a simple text file can get the data where it
> has to be.
[...]
OK, maybe that helps; I just tried around...
...first want to try a pure R-way.
But this might be a fallback.
Thanks.
Oliver
___
baptiste auguie googlemail.com> writes:
>
> Hi,
>
> Try this,
>
> library(png)
> example(readPNG)
[...]
If "rasterImage" would be available, I think this would be the right hint.
But it isn't.
So I can load the pic,
Hello,
how can I load an external picture/image file to screen?
I want to use locator() then to get coordinates of that picture...
...in other words I want to use R to do some measurements on a picture.
Therefore I need to load the image into R display,
and that displaying needs to work togethe
Thanks for the information.
On Sat, May 29, 2010 at 01:15:29PM +, Hans W. Borchers wrote:
> Oliver Kullmann swansea.ac.uk> writes:
>
> >
> > Hello,
> >
> > I couldn't find information on whether the logarithmic integrals
> >
> > Li_m(x)
Hello,
I couldn't find information on whether the logarithmic integrals
Li_m(x) = integral_0^x log(t)^(-m) dt
for x >= 0 are available in R?
Best wishes
Oliver
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might use range() for locating the edges and then go down some percent of the
range or so...
...but maybe there is a better alternative to this approach?
Oliver
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PLEASE
Hello,
is there a package for reading in Hex-Data and
calculating vlaues into twos complement and back to
normal integer values?
Oliver
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PLEASE do read the posting
Oliver first.in-berlin.de> writes:
>
> Hello,
>
> is there a possibility to call a program (like with system())
> and read back the data it prints to stdout?
>
> On Unix/Linux there is the popen() systemcall, which does this.
>
> Is it available in R?
> Ma
Hello,
is there a possibility to call a program (like with system())
and read back the data it prints to stdout?
On Unix/Linux there is the popen() systemcall, which does this.
Is it available in R?
Maybe via extra packages?
Ciao,
Oliver
__
R
problem). The mystirious thing about it is that I didn't change
anything before this happend, I didn't upgrade R, Tinn-R or any other program,
it happend right in the middle of working with R.
Many thanks in advance, and kind regards,
Oliver
__
hop the box drawn by lines into an even 3x3 grid- is
this possible easily?
Thanks!
--
Wells Oliver
we...@submute.net
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PLEASE do re
thank you! (I was on the wrong track, and thinking these would
be "levels".)
Oliver
> In this case where the is only one dimension, the table object is more
> like a named vector. The first "vector" in your terminology (but would
> be more accurately called &
ataframe, to get a
name for the two vectors constituting the table, then a get a vector
of strings(!), which are then converted to integers.
By the way, the type of E$singles is integers.
Thanks for your help!
Oliver
__
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#x27; argument to ="mrt" seems, superficially, to solve
the problem. However, when the dependent variable is a dissimilarity matrix,
shouldn't method="dist" be used (as per the examples)?
Thanks, in advance, for any help on this error.
Oliver
___
Duncan Murdoch stats.uwo.ca> writes:
[...]
> MASS (function rational())
> rcdd
> Rmpfr
[...]
OK, I will look for those packages.
Maybe they will help.
Thank you.
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PLEA
Hello,
which packages are you talking about?
And... are thoise packages using integer-based calculations?
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PLEASE do read the posting guide http://www.R-project.org/posti
Oh strange...
> round(108.275 , 2)
[1] 108.28
> round(208.275 , 2)
[1] 208.28
> round(308.275 , 2)
[1] 308.27
>
looks not like what one should expect...
R version 2.9.2 (2009-08-24)
Ciao,
Oliver
__
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Hello,
I need to have a "kaufmaennisches Runden" function.
Is there already something like that?
It means: rounding up the 5, instead of rounding it down.
So, 245.455 would give 245.46
I found no option for this.
Maybe there is a package for it
ion in any case
Oliver
P.S. Perhaps there is some graph-drawing package? (Here a "graph"
consists of vertices and connecting edges.)
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PLEASE do read the p
is could be done with:
library(gamlss.dist)
CI<-SE * qBE(p=0.975,mu=predicted.value,sigma=sqrt(var1))
#...where SE has already been calculated somehow!
Thanks in advance for any help/ideas/suggestions! As you can see, I am out of
my depth here!
Many thanks,
Oliver
[[alternative HTML versio
: "Reorder factor
levels") provides a piece of sample code for the task. Should be easy to
adapt it to your problem.
Oliver
P.S.: Maybe it's not a bad idea to provide a more readable
transformation of your code next time. What about replacing the whole
'V96
cbind(1:length(data[.x, "First"][[1]]),
# and that was the incremental counter
sapply(data[.x, ],
# and finally the values which unfortunately get turned into
characters
function(.y) return(.y ) ) ) ) )))
> colnames(result)[1:2] <- c(&quo
e might be an elegant and not too complicated way to
do this with one or several of the functions provided by the 'reshape'
package, but due to my lack of experience with R in general, this
package in particular and the complexity of the task I
OK, now it works... just using [ and ] or [[ and ]] works.
I thought have tried it before... why does it workj now and not before?
hmhh
sorry for the traffic
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PLEASE do
Hello,
say I have a dataframe x
and it contains rows like "ch_01", "ch_02" and so on.
How can I select those channels iundirectly, by name?
I tried to select the data with get() but get() seems only to work
on simple variables?
Or how to do it?
I need something like that:
name1 <- "ch_01"
Liebe Liste,
bin noch absoluter R-Anfänger und trotz fleißigen Lesens der
Dokumentation noch nicht zur Lösung des folgenden Problems vorgedrungen.
Die Werte einer 2D-Matrix sollen in einem einzigen 2D-Plot dargestellt
werden, in dem jeweils für die Werte einer Zeile ein Graph aus mit
Linien verb
CDT" "2009-06-03 CDT" "2009-06-05 CDT" "2009-06-06 CDT"
[57] "2009-06-07 CDT" "2009-06-09 CDT" "2009-06-10 CDT" "2009-06-11 CDT"
"2009-06-12 CDT" "2009-06-13 CDT" "2009-06-14 CDT"
I&#x
Any tips? Thank you!
--
Wells Oliver
we...@submute.net
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PLEASE do read the posting guide http://www.R-project.org/posting-
Sage in some sense. See
http://www.ok-sat-library.org/
As such I feel responsible to install only software which is correct (and
I need to install from sources).
Hope this helps a bit --- feel free to ask!
Oliver
> Among the missing items are OS specifics, why you need
> to install from
ody has to say something here?
Shall a bug report be submitted?
Or will R 2.10.1 have fixed the bug?
Oliver
--
Hello,
I have installed R version 2.9.2, and everything
works fine, but when attempting to install version 2.10.0
I get:
running code in 'dat
, family='Lucida Grande')
plot(salaries$yearID, salaries$salary/100, bg='#FF')
But that does nothing. How can I accomplish this? Thanks!
--
Wells Oliver
we...@submute.net
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