I am currently using "aheatmap" which is generating heatmaps based on
Pearson correlation. My data consists of RPKM values for genes from 2
groups. Each group has about 70 samples.
Is there anyway that I can modify "aheatmap" so that it generates heat maps
based on the actual input values (RPKM)
I am currently using "aheatmap" which is generating heatmaps based on
Pearson correlation. My data consists of RPKM values for genes from 2
groups. Each group has about 70 samples.
Is there anyway that I can modify "aheatmap" so that it generates heat maps
based on the actual input values (RPKM)
t exactly how much space to put in the
> outer margins will probably not be trivial.
>
> Another option would be to not use `pairs`, but use the `layout`
> function directly and loops to do your plots (and use the `respect`
> argument to `layout`).
>
> On Tue, Jul 19, 2016
The default shape for this correlation scatterplot is rectangle. I changed
it to square, but then the x-axis spacing between squares are off. Is
there an easy way to change x-axis spacing between squares to that of the
y-axis spacing size?
I decided to hide the name values of the diagonal square
Another method, similar to William's.
x <- 3
save(x,file="test.Rdata")
x <- 4
y <- local({
load("test.Rdata")
stopifnot(length(ls())==1)
environment()[[ls()]]
})
On Fri, Jul 27, 2012 at 3:53 PM, Rolf Turner wrote:
> On 28/07/12 06:59, Alireza Mahani wrote:
>>
>> I w
I can't help you decide which bandwidth method to use, but here's how
you view the density source code...
methods("density")
density.default
On Wed, Jul 25, 2012 at 5:56 PM, li li wrote:
>
> Hi all,
> I have a question regarding the density function which gives the
> kernel density estimator.
at I really
want is a to create a class of two dashes in a row and then negate that. Is
it possible to create a class of repeated characters? If so, it might be
further complicated that "-" is a special character in brackets and can only
go first or last.
Can anyon
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