[R] GSA getting ngenes into the list

score, p and FDR Table of positive sets with same But the list object does not contain ngenes. How do I manipulate ngenes into the list? Suggestions appreciated. Thank you. -- Loren Engrav, MD Professor and Chief, Plastic Surgery, 1977-2001 Associate Director, Burn Center, 1977-2001 Univ

[R] GSA list to text file

Greetings and thank you Am using GSA and have the GSA.listsets object of class list which displays fine But how do I get the object written to a text file? I see to convert to data frame and then write.table but > GSAwk1df <- data.frame(GSAwk1list, row.names=NULL, check.rows=FALSE, check.names

Re: [R] Junk or not Junk ???

ac Entourage But it was staring me in the face, called Mailing List Manager Give this Mailing List Manager an list address and voila, no junk from that mailing list, all goes in the in box Thank you so much Loren Engrav Univ Wash Seattle > From: Patrick Connolly <[EMAIL PROTECTED]> >

Re: [R] Junk or not Junk ???

0 (PST) > To: > Subject: Re: [R] Junk or not Junk ??? > > > > Loren Engrav wrote: >> >> Thank you >> >> As per advice from several R users I have set >> >> r-project.org, stat.math.ethz.ch,fhcrc.org, stat.ethz.ch, math.ethz.ch, >> hyp

Re: [R] Junk or not Junk ???

computing to no avail Is this just how it is or have I still missed the "fix" to keep R emails out of junk? Thank you Loren Engrav Univ Wash Seattle > From: Duncan Murdoch <[EMAIL PROTECTED]> > Date: Mon, 03 Dec 2007 22:10:18 -0500 > To: Loren Engrav <[EMAIL PROT

[R] Junk or not Junk

So a message from Benilton Carvalho <[EMAIL PROTECTED]> (sent by [EMAIL PROTECTED]) arrives and goes in the Junk Mail even tho I have set @r-project.org to not be junk Why does this go in Junk mail if @r-project.org is defined as not junk? -- If we knew what we were doing, it would not be c

Re: [R] Packages - a great resource, but hard to find the right one

e next question, would be more helpful to say "in vignette xyz at the bottom you will find abc which will show you what to do" and would also follow the example of Bolker which educates and encourages the newbies Thank you Loren Engrav Univ Wash Seattle _

Re: [R] Trying to get around R

stscript output as at this point I either have a decorum point or I don't Thank you for discussing/listening Loren Engrav Univ Wash Seattle > From: Julian Burgos <[EMAIL PROTECTED]> > Date: Tue, 20 Nov 2007 11:12:45 -0800 > To: Loren Engrav <[EMAIL PROTECTED]> >

Re: [R] Trying to get around R

pation. Loren Engrav Univ Wash Seattle > From: ecatchpole <[EMAIL PROTECTED]> > Date: Tue, 20 Nov 2007 17:07:23 +1100 > To: Loren Engrav <[EMAIL PROTECTED]> > Cc: > Subject: Re: [R] Trying to get around R > > Loren, > > There's a good reason

Re: [R] Trying to get around R

h was "You might have better luck with this on the Bioconductor mailing list ..." Rather than to the universe... "Using the wrong list: this is for R-sig-mac, and the topic occcurred there recently." All in an effort to encourage promote useful and increasing exchange partic

Re: [R] makeGOGraph node spacing

Thank you I will move it over > From: Ben Bolker <[EMAIL PROTECTED]> > Date: Sun, 18 Nov 2007 08:05:15 -0800 (PST) > To: > Subject: Re: [R] makeGOGraph node spacing > > > > > Loren Engrav wrote: >> >> Greetings >> >> Am newbie

[R] makeGOGraph node spacing

ntent and I need worry about them or are they just graphical and I need not 2) is there a way to spread out the nodes to prevent label overlap 3) if the process cut warnings to 2, why no change in the graph Thank you Loren Engrav, MD Univ Washington Seattle I sent this 9 and 3hrs ago but someho

Re: [R] Rgraphviz

Finale to this thread... Several old discussions mentioned Xcode as the culprit But I installed that months ago and have used it ever since so I ignored the message But then I thought why not reinstall And reinstall of Xcode seems to have fixed the problem So install graphviz 2.12 and reinstall X

Re: [R] Rgraphviz

iz.so, 6): corrupt binary, library ordinal too big Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz' Error: package/namespace load failed for 'Rgraphviz' Thank you 425 644 7020 > From: Robert Gentleman <[EMAIL PROTECTED]> > Date: Thu, 15 Nov 20

[R] Rgraphviz

Rgraphviz I cannot load it I have re-installed etc etc etc etc And cannot load it Message is 6): Library not loaded: /usr/local/lib/libgvc.3.dylib Referenced from: /Library/Frameworks/R.framework/Versions/2.6/Resources/library/Rgraphviz/lib s/ppc/Rgraphviz.so Reason: image not found Error :

[R] Rgui Windows command history

With the Mac and R.app, there is a window to the right of the console wherein all commands are display and can be re-chosen by double clicking. Does a similar feature exist with Windows and Rgui? Or have I missed it somewhere? Thank you. [[alternative HTML version deleted]] ___