Re: [R] error message

2011-11-07 Thread JulianaMF
As I mentioned, the archives with the exact thread were back at the lab. Here they are: > read.structure(file = "SimStru.str") How many genotypes are there? 820 How many markers are there? 10 Which column contains labels for genotypes ('0' if absent)? 0 Which column contains the population

Re: [R] error message

2011-11-05 Thread JulianaMF
Humm... I was using adegenet / ade4 packages and both R and R studio prompted the questions. Sorry, I did so many searches on R help and Adegenet help that I forgot to mention the packages I was using... Juliana -- View this message in context: http://r.789695.n4.nabble.com/error-message-tp32234

Re: [R] error message

2011-11-05 Thread JulianaMF
Hello Michael, Sorry, I am just starting to lear all this. Here is one of my input files (from a .str file) in which the first column are the individuals, the second is the pop info (in this case I am stating that I have one pop because I am still trying to find out which are the clusters in my sam

Re: [R] error message

2011-11-04 Thread JulianaMF
Hello, I am a PhD candidate at University of Sao Paulo, finishing the thesis and know nothing about R language... I am trying to analyze a structure data set (STRs) with 82 samples and 10 loci (missing data = -9) and I keep getting the same Error in text[(last line - n + 1):last line] : only 0's ma