Re: [R] bagged importance estimates in earth problem

2009-05-18 Thread Joseph Retzer
Thanks for the info. some notes below: --- On Mon, 5/18/09, Max Kuhn wrote: From: Max Kuhn Subject: Re: [R] bagged importance estimates in earth problem To: "Joseph Retzer" Cc: gavin.simp...@ucl.ac.uk, "R help" Date: Monday, May 18, 2009, 1:03 PM > If you read my m

Re: [R] bagged importance estimates in earth problem

2009-05-18 Thread Joseph Retzer
ers). Again, a more careful read of my original email would have made that clear. Thanks, --- On Mon, 5/18/09, Max Kuhn wrote: From: Max Kuhn Subject: Re: [R] bagged importance estimates in earth problem To: "Joseph Retzer" Cc: gavin.simp...@ucl.ac.uk, "R help" Date: Mond

Re: [R] bagged importance estimates in earth problem

2009-05-18 Thread Joseph Retzer
: "Joseph Retzer" Cc: "R help" Date: Saturday, May 16, 2009, 5:19 PM On Sat, 2009-05-16 at 08:57 -0700, Joseph Retzer wrote: > I was trying to produced bagged importance estimates of attributes in earth > using the caret package with the following commands: > >  fi

[R] bagged importance estimates in earth problem

2009-05-16 Thread Joseph Retzer
I was trying to produced bagged importance estimates of attributes in earth using the caret package with the following commands:   fit2 <- bagEarth(loyalty ~ ., data=model1, B = 10)   bagImpGCV <- varImp(fit2,value="gcv") My bootstrap estimates are produced however the second command "varImp" p

Re: [R] Thin frame line around R pdf output in LaTeX

2008-07-26 Thread Joseph Retzer
in LaTeX To: "Joseph Retzer" <[EMAIL PROTECTED]> Cc: "R help" <[EMAIL PROTECTED]> Date: Saturday, July 26, 2008, 2:58 AM There is no 'R 2.7' (see the posting guide). Have you followed the advice in the posting guide of using the latest (R-patched) version

[R] Thin frame line around R pdf output in LaTeX

2008-07-25 Thread Joseph Retzer
I'm using R 2.7 on an Intel MAC. When I produce a pdf graph, I save the output window from the menu to a pdf file. This gives a very nice quality graph. However when I include the graph in a LaTeX document (actually beamer presentation) using \includegraphics I get a graphic with a very light

[R] Cluster Package - Clara w/ categorical variables

2007-12-17 Thread Joseph Retzer
I'm running a cluster analysis with many observations (approx. 7,000) using both continuous and categorical variables. PAM is a theoretically appealing approach however I believe the number of observations makes its use untenable. CLARA, which uses the PAM algorithm seems like the algorithm to u

[R] Cluster Package - Clara w/ categorical variables

2007-12-17 Thread Joseph Retzer
I'm running a cluster analysis with many observations (approx. 7,000) using both continuous and categorical variables. PAM is a theoretically appealing approach however I believe the number of observations makes its use untenable. CLARA, which uses the PAM algorithm seems like the algorithm to u

[R] Howard Harris k-means

2007-10-22 Thread Joseph Retzer
I've been searching for R code which performs the Howard Harris variant of k-means clustering but cannot seem to locate it. The Hartigan-Wong algorithm seems quite similar but not the same. Does anyone know of code that would accomplish this? The algorithm looks simple enough to implement mys

[R] CLUE package consensus function cl_medoid behavior

2007-09-11 Thread Joseph Retzer
When using cl_medoid to create a consensus clustering I've noticed that the list element in the resulting object containing the cluster assignments by case will switch between the [1] and [3] positions. This has happened when re-running the code without changes. Has anyone else experienced this