Re: [R] Problem with mclapply -- losing output/data

2011-06-22 Thread Janet Young
Hi Elizabeth, I just found your thread after experiencing a similar problem (I was also using some IRanges/GenomicRanges functions). You've probably figured it out by this time - I'm actually curious to know what you found? I think I've tracked it down in my case, where a small minority of the

Re: [R] XML segfault on some architectures

2011-06-08 Thread Janet Young
Hi, Our sysadmin updated libxml2 to version 2.7.8, and now xmlTreeParse works fine with no segfault. Thank you very much - that was very helpful, Janet On Jun 8, 2011, at 11:59 AM, Janet Young wrote: > Dear Prof Ripley, > > Apologies - I've re-sent that to Duncan Temple La

Re: [R] XML segfault on some architectures

2011-06-08 Thread Janet Young
on, but it looks like our libxml2 is version 2.6.26. I'll ask my sysadmin people whether they can update that, and try again. Janet On Jun 7, 2011, at 10:54 PM, Prof Brian Ripley wrote: > On Tue, 7 Jun 2011, Janet Young wrote: > >> Hi, >> >> I found an architec

[R] XML segfault on some architectures

2011-06-07 Thread Janet Young
26.1.el5xen #1 SMP Tue Nov 9 14:13:46 EST 2010 i686 i686 i386 GNU/Linux I think I've included all the relevant info below, but please let me know if there's anything else you'd like to see. thanks, Janet ------- Dr. J

[R] installing RCurl when libcurl is in non-standard location

2010-01-13 Thread Janet Young
rious output below that I hope will help in figuring this out. Is there anything else that would be useful to know? I can also ask our sysadmin for help if that makes more sense than asking you all via r-help. Thanks very much in advance for any ideas, Janet Young --- [2] zor

[R] dotted lines for branches in ape's plot.phylo?

2008-10-27 Thread Janet Young
, but that doesn't seem to help me get dotted lines. thanks, Janet Young __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide com

[R] problem with putting text in outer margins (mtext outer=TRUE)

2008-07-18 Thread Janet Young
7;s an ugly and meaningless set of plots, but you can see my problem: the two "Position" strings are right up against the plot, the bottom one even overlapping the bottom plot. Does anyone know how I can get the text to appear in the big white space of the outer margin, rather tha

[R] RMySQL installation

2007-12-21 Thread Janet Young
ary libraries in LD_LIBRARY_PATH or some other thing R is using to look for libraries? I've pasted the command I used for installation, and the output of the build process below, as well as the output of sessionInfo. Thanks in advance for any help, Janet Young -----