[R] RCytoscape setPosition error

Hi Can some one please point out where i am wrong. I am trying to position set of nodes column-wise in cytoscape using RCytoscape AD BE CF --- g <- new ('graphNEL', edgemode='undirected') cw <- CytoscapeWindow ('smallExample', graph=RCytoscape::makeSimpleGraph()) layo

[R] Layout control from RCytoscape

Hi I have a list of nodes and edges. I want to draw a graph from two different direction left and right. I am drawing the required graph which is growing from left. Similar will be the case that will grow from right. the one that grows from right may have few nodes present in left subtree.

[R] bit wise operation on long bit vector?

Hi Is there any function to do bitwise or/and/xor on long bit vectors? "a" ".." "b" "001110001100.." "c" "

Re: [R] problem reading file containing bit vector

Its working now. I was missing something. dataFile = read.table("./Data/occTable.csv", sep ='\t', header=TRUE, colClasses = "character"); i=1 x = dataFile[i,]; x Thanks a lot. On Sun, Jan 30, 2011 at 12:25 PM, David Winsemius wrote: > > On Jan 30, 2011, a

[R] problem reading file containing bit vector

Hi I have a tab delimited file with fillowing content: "swissProtID""entrezID""bitVec" "Q62924" "---""10001000" "P18897" "---""01000100" "Q62736" "---""10100010" "P13589"

[R] multicore package: help

I have matrices as below: a <- matrix(c(1:10, 11, 12), 3,4) aa <- data.frame(a) b <- matrix(c(10:20, 21), 4,3) bb <- data.frame(b) ... and many more matrices. st = list(aa,bb, . ) mclapply(st, FUN, mc.cores=6); #this function apply the function to the elements of the list 'aa', 'bb'...etc