Ben - I'm sorry, you're right! The following website shows how to make a
volcano plot using ggplot2.
http://bioinformatics.knowledgeblog.org/2011/06/21/volcano-plots-of-microarray-data/
Enjoy!
Anna
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View this message in context:
http://r.789695.n4.nabble.com/r-help-volcano-plot-tp3792651p3795
Use the ggplot2 package in order to make a volcano plot! Check out the
following book for more information about the package: ggplot2: Elegant
Graphics for Data Analysis (Use R) by Hadley Wickham. ggplot2 is great for
creating professional graphics in no time.
If you look up stat_density in
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