[R] ncdf installation

2010-03-09 Thread Bala subramanian
Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to

[R] overlap contour

2009-05-13 Thread Bala subramanian
Friends, I have two covariance matrices (m1 and m2) of same size (150x150). I used contourplot function to make contour plots individually (c1 and c2). I am interested in making one contourplot overlapping the two individual contours so that the portion of the plot above and below the diagonal can

[R] plotting with R

2009-04-21 Thread Bala subramanian
Friends, i) I am new to R. Kindly suggest some resources that has examples of plotting with R. ii) How to set number of tick marks and labels, i have a x axis ranging fro 1 to 21. By default R shows the tick marks at 5, 10,15,20. How can i change this. Thanks, Bala [[alternative HTML ve

Re: [R] joined R-today

2009-04-21 Thread Bala subramanian
Dear Marc and Peter, Thank you so much. In fact disabling the SElinux solved the problem. Bala On Tue, Apr 21, 2009 at 4:43 PM, Marc Schwartz wrote: > > On Apr 21, 2009, at 9:28 AM, Peter Dalgaard wrote: > > Bala subramanian wrote: >> >>> Hi, >>> I

Re: [R] ncdf,RNetCDF

2009-04-21 Thread Bala subramanian
Hi Andris, THANK YOU SO MUCH. THIS WAS THE PROBLEM INDEED. When disable SE Linux, it worked fine. Thank you once again, Bala On Tue, Apr 21, 2009 at 4:01 PM, Andris Jankevics wrote: > Hi, > > just quick "googling" gave me the hint that it can be ralated to SE > Linux restrictions of Fedora li

[R] ncdf,RNetCDF

2009-04-21 Thread Bala subramanian
Friends, Someone please share your experience in installing ncdf and RNetCDF in fedora10. I am not able make it work as it throws me the following error. My R version is 2.8.0. > library(ncdf) unable to load shared library '/usr/lib/R/library/ncdf/libs/ncdf.so': /usr/lib/R/library/ncdf/libs/n

Re: [R] joined R-today

2009-04-21 Thread Bala subramanian
e path for the installation, should it be */usr/local/lib* or */usr/lib/R/lib* or * /usr/lib/R/library/ncdf/libs/* Bala On Tue, Apr 21, 2009 at 2:14 PM, Bala subramanian wrote: > Hi, > I tried to install from four different mirrors. The result is the same. I > dnt understand what the fo

Re: [R] joined R-today

2009-04-21 Thread Bala subramanian
n tried to change the permission of ncdf.so but still i am not able to load the library. Bala On Tue, Apr 21, 2009 at 2:03 PM, Dimitri Liakhovitski wrote: > Try to install from scratch from a different mirror. > Dimitri > > On Tue, Apr 21, 2009 at 6:21 AM, Bala subramanian > wrote: &

Re: [R] joined R-today

2009-04-21 Thread Bala subramanian
/lib/R/library/ncdf/libs/ncdf.so': /usr/lib/R/library/ncdf/libs/ncdf.so: cannot restore segment prot after reloc: Permission denied Error in library(ncdf) : .First.lib failed for 'ncdf' Again the same error, Bala On Tue, Apr 21, 2009 at 12:12 PM, Liviu Andronic wrote: > On Tue,

Re: [R] joined R-today

2009-04-21 Thread Bala subramanian
2. then call the package using "library(name of the package)" > > It helps to know where your R library directory is on your computer. > > HTH Simon. > > > - Original Message - From: "Bala subramanian" < > bala.biophys...@gmail.com> > T

[R] joined R-today

2009-04-21 Thread Bala subramanian
Friends, I am a newbie to R. Just installed and started with R. I installed netcdf library (netcdf-4.0.tar.gz) and then ncdf package of R from CRAN with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/local/netcdf/include -with-netcdf_libdir=/usr/local/netcdf/lib"