Re: [R] [EXT] Mac ARM for lm() ?

Thanks, and all well taken. But are my beautiful GPUs (with integrated memory architecture) really nothing more than a cooling area for the chip? On Fri, Nov 15, 2024 at 6:06 AM Martin Maechler wrote: > > Andrew Robinson via R-help > > on Thu, 14 Nov 2024 12:45:44 + writes: > >

Re: [R] R coding to extract allele frequencies from NCBI for ALL alleles of one SNP?

If you haven't already done so, this might be better posted on Bioconductor: https://www.bioconductor.org/ Cheers, Bert On Fri, Nov 15, 2024 at 2:53 AM Clark Jeremy wrote: > Dear All, > > The following code extracts from NCBI very nice output for ONE allele of a > SNP (often the allele with th

Re: [R] [EXT] Mac ARM for lm() ?

> Andrew Robinson via R-help > on Thu, 14 Nov 2024 12:45:44 + writes: > Not a direct answer but you may find lm.fit worth > experimenting with. Yes, lm.fit() is already faster, and .lm.fit() {added to base R by me, when a similar question was asked years ago ...

[R] R coding to extract allele frequencies from NCBI for ALL alleles of one SNP?

Dear All, The following code extracts from NCBI very nice output for ONE allele of a SNP (often the allele with the second largest frequency - usually termed the minor allele). It gives an average minor allele frequency from all NCBI sources (which is what I want, except I'd like the addition o