Re: [R] installing an R package

2022-04-28 Thread Bogdan Tanasa
Thank you all for your time and suggestions. The issue is that install.package() does not work, because of large file size, but at the end I have solved it by using /; options(timeout=1 On Thu, Apr 28, 2022 at 4:01 PM Uwe Ligges wrote: > > > On 28.04.2022 23:55, David Winsemius wrote: > >

Re: [R] installing an R package

2022-04-28 Thread Uwe Ligges
On 28.04.2022 23:55, David Winsemius wrote: Pretty sure the right way to install that package is with the Bioc installer. or simply install.packages() after setting the repository. Best, Uwe Ligges Sent from my iPhone On Apr 28, 2022, at 3:35 PM, Bogdan Tanasa wrote: HI everyone,

Re: [R] installing an R package

2022-04-28 Thread David Winsemius
Pretty sure the right way to install that package is with the Bioc installer. Sent from my iPhone > On Apr 28, 2022, at 3:35 PM, Bogdan Tanasa wrote: > > HI everyone, > > I must transfer a package from one platform (AWS) where I was able to > install the package > > to another platform (loc

[R] installing an R package

2022-04-28 Thread Bogdan Tanasa
HI everyone, I must transfer a package from one platform (AWS) where I was able to install the package to another platform (local PC), where I am not able to install the package. The package is called : BSgenome.Hsapiens.UCSC.hg38 Is there a way to transfer the files from BSgenome.Hsapiens.UCSC

Re: [R] R 4.2.0: write.table() "clipboard-1024" copies only columns name

2022-04-28 Thread Tomas Kalibera
On 4/28/22 16:02, Jinsong Zhao wrote: Hi Sergiy, I can confirm this. I don't find any bug report related with "clipboard" on bugzilla. I will open a bug report. I confirm this is a bug in the connections code implementation of "clipboard". R 4.2 has a new version which uses Unicode and unfo

Re: [R] glm with family binomial and link identity

2022-04-28 Thread Martin Maechler
TLDR: No, there was no such change in R 4.2.0 > Ralf Goertz > on Wed, 27 Apr 2022 10:27:33 +0200 writes: > Hi, > I just noticed that (with my version 4.2.0) it is no longer possible to > use glm with family=binomial(link=identity). Why is that? It was > possible with

Re: [R] R 4.2.0: write.table() "clipboard-1024" copies only columns name

2022-04-28 Thread Erich Subscriptions
Die you try clipr::write_clip as an alternative? > On 28.04.2022, at 10:38, Sergei Ko wrote: > > I used write.table(mat, "clipboard-1024", sep="\t", row.names=FALSE) to > copy from R to Excel in previous versions. After updating to 4.2.0 it > copies column names only to clipboard. Win 10 64 bit

Re: [R] glm with family binomial and link identity

2022-04-28 Thread Ralf Goertz
> Am Wed, 27 Apr 2022 10:27:33 +0200 schrieb Ralf Goertz > > > Hi, > > > > I just noticed that (with my version 4.2.0) it is no longer possible > > to use glm with family=binomial(link=identity). Why is that? It was > > possible with 4.0.x as a colleague of mine just confirmed. After all > > it is