Likely impossible to answer without seeing your code.
Bert Gunter
"The trouble with having an open mind is that people keep coming along and
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
On Wed, Oct 6, 2021 at 11:33 AM Gabriel Toro wrote:
> Hi,
>Also, I checked my options and I have my email set to plain text...
The warning inserted by the mailing list at the bottom of your message below
> [[alternative HTML version deleted]]
indicates that you may still need to understand your mail client better.
On October 6, 2021 10:30:49 AM
Since the sqlite package is contributed, it is NOT related to "core R", and is
in fact technically off-topic on this list.
FWIW all SQL implementations work better with indexes, but AFAIK the R data
frame support does nothing with indexes. This may be related to your question,
or not. I am not
https://support.bioconductor.org and the community slack (sign up at
https://bioc-community.herokuapp.com/ ) as well as the general site
https://bioconductor.org . Actually your question sounds like a SQLite question
� JOIN a table, versus parameterized query. One could perhaps construct the
re
Thank you Bert, I set up a new thread on
BioStars [1]. So far, I'm a bit
unfamilliar with Bioconductor (but will
hopefully attend a course about it in
November, which I'm kinda hyped about),
other than installing and updating R
packages using BiocManager Did you
think of something els
Hi,
I have a function, which defines an array of dimensions 5000 by 60, calculates
the values within that array and then returns the array on exit.
I get an error: Error in my_simulated[ir, 1:it] : incorrect number of dimensions
For some strange reason, the array is somehow being changed from
Hello,
Thank you for your help, I really appreciate it, I was able to solve the
problem!
Here is a part of my dataframe (just in case...):
> dput( head( behavioral_df) )
structure(list(ID = c(1, 2, 3, 4, 5, 6), DOB = c("9/53/1959",
"4/8/1953", "2/21/1961", "10/11/1948", "9/4/1962", "8/22/1953"
Generally, such gene-related questions are better asked on Bioconductor
than here. They also might know of more efficient, purpose built tools for
your efforts there. No guarantees, of course, and you might get a helpful
response here. But if not ...
Bert Gunter
"The trouble with having an open m
Dear r-help readers,
why is it so much slower to query an
sqlite database using RSQlite «from the
outside» using param like
statement <-
"SELECT * FROM gene2refseq
LEFT JOIN gene_info ON
gene_info.GeneID = gene2refseq.GeneID
WHERE gene2refseq.`R
Perhaps it's R packages and the security policies -- checks for malicious
software, etc. -- of the repositories on which they reside that Thomas
should be concerned with. R, itself, is fine(checksums are provided), but,
as you say, can be programmed to do anything. So R packages can certainly
do da
On Tue, 5 Oct 2021 22:20:33 +
Thomas Subia wrote:
> Some co-workers are wondering about how secure R software is.
I'm afraid that this question is too hard to answer without their
threat model. Secure against what, specifically?
> Is there any documentation on this which I can forward to th
Colleagues,
Some co-workers are wondering about how secure R software is.
Is there any documentation on this which I can forward to them?
All the best,
Thomas Subia
Quality Engineer
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