Re: [R] Sanity check in loading large dataframe

2021-08-08 Thread PIKAL Petr
Hi Bert Yes, in this case which is not necessary. But in case NAs are involved sometimes logical indexing is not a best choice as NA propagates to the result, which may be not wanted. x <- 1:10 x[c(2,5)] <- NA y<- letters[1:10] y[x<5] [1] "a" NA "c" "d" NA y[which(x<5)] [1] "a" "c" "d" dat <-

Re: [R] Issue regarding specifying pdBlocked matrix for random effects vcov in nlme package

2021-08-08 Thread David Winsemius
Dear Dr. David; Re; List rejection I'm unable to explain why this posting was refused. It does have 4 image files attached. That is more than I typically see on Rhelp. I'm only a volunteer moderator, and not one of the owners of the list. I speculate that if you were to repost to rhelp (and NO

Re: [R] Calculation of Age heaping

2021-08-08 Thread Avi Gross via R-help
It is not too clear to me what you want to do and why that package is the way to do it. Is the package a required part of your assignment? If so, maybe someone else can help you find how to properly install it on your machine, assuming you have permissions to replace the other package it seems t

[R] Calculation of Age heaping

2021-08-08 Thread Md. Moyazzem Hossain
Dear R-expert, I hope that you are doing well. I am interested to calculate the age heaping for each digit (0,1,...,9) based on my data set. However, when I run the R code, I got the following errors. Please help me in this regard. ## library(remotes) inst

Re: [R] No "doc" directory in my installation of R.

2021-08-08 Thread Duncan Murdoch
If you start R just using the regular command line version (not RStudio), does Sys.getenv("R_DOC_DIR") point to /usr/share/R/doc ? The standard R startup script should do that, but if it doesn't maybe you've got an override? Or maybe you have R_DOC_DIR defined yourself? Duncan Murdoch

Re: [R] No "doc" directory in my installation of R.

2021-08-08 Thread John Dougherty via R-help
On Sat, 7 Aug 2021 20:26:13 -0700 (PDT) Jeff Newmiller wrote: Documentation on most Linux systems, regardless of release, is commonly located under the /usr/share directory. For R that is /usr/share/doc/R. There is also a "man" entry for R. The rstudio help list might be able to help more than

Re: [R] HOW TO SOLVE THIS PROBLEM (RVALS)

2021-08-08 Thread Rui Barradas
Hello, nobs is missing in your example. Assuming that envelope is the function in package base boot, I cannot reproduce the error. set.seed(2021) nc <- 1 nobs <- 100 M1 <- matrix(evd::rfrechet(nc*nobs),nrow=nobs,ncol=nc) M <- t(apply(M1,2,sort)) E <- boot::envelope(mat=M) #compute 95% co

[R] HOW TO SOLVE THIS PROBLEM (RVALS)

2021-08-08 Thread SITI AISYAH ZAKARIA
Hi, Can anyone help me how to solve this problem? #calculation of confidence intervals 1. > nc <- 1 2. > M1 <- matrix(rfrechet(nc*nobs),nrow=nobs,ncol=nc) 3. > M <- t(apply(M1,2,sort)) 4. > E <- envelope(mat=M) #compute 95% confidance bands *Error in envelope.matrix(mat = M) : rvals must be

Re: [R] Markov modeling using msm

2021-08-08 Thread H
On 08/08/2021 03:43 AM, Rui Barradas wrote: > Hello, > > There are CRAN packages, for instance, packages DTMCPack and markovchain, > that require transition probabilities as input. See this R-bloggers post [1]. > > > [1] https://www.r-bloggers.com/2016/01/getting-started-with-markov-chains/ > > >

Re: [R] No "doc" directory in my installation of R.

2021-08-08 Thread Rui Barradas
Hello, R 4.1.0 on Ubuntu 20.04. My ls command on /usr/lib/R on my home computer gives what Rolf posted, so I agree with every body that this is not an R issue and would insist with RStudio and ask for their help again. They are generally helpful, btw. I follow installation instructions to the

Re: [R] No "doc" directory in my installation of R.

2021-08-08 Thread Duncan Murdoch
Jeff pointed out where the doc directory is installed in Ubuntu: /usr/share/R/doc. So this is definitely an RStudio issue: perhaps it got "tweaked", or perhaps Rolf installed a version meant for some other distribution. In either case, off-topic in R-help, I think. Duncan Murdoch On 08/08/

Re: [R] No "doc" directory in my installation of R.

2021-08-08 Thread John Kane
R version 4.1.0 (2021-05-18) RStudio 1.4.1714 Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 20.04.2 LTS I do not see a doc folder at R level but a lot of newer packages, probably tidyverse derived seem to have a doc sub-folder containing documentation files For example corrplot has

Re: [R] Markov modeling using msm

2021-08-08 Thread Rui Barradas
Hello, There are CRAN packages, for instance, packages DTMCPack and markovchain, that require transition probabilities as input. See this R-bloggers post [1]. [1] https://www.r-bloggers.com/2016/01/getting-started-with-markov-chains/ Hope this helps, Rui Barradas Às 02:21 de 08/08/21, H