[R] space between bars of a group in ggplot2

2020-12-14 Thread azam jaafari via R-help
Hello Dear I want to make a barplot for groups with three repetitions and same values. dataset is like this: groups:                  a                          b                        c value:           1.2, 1.2, 1.2     2.5, 2.5,2.5   Condition: sat, sat, sat,   

Re: [R] Hello! Problem - function ''matord'' in R

2020-12-14 Thread Jeff Newmiller
... and if so, then you are on the wrong mailing list... On December 14, 2020 1:43:49 PM PST, "T. A. Milne via R-help" wrote: >Might the desired function "matord" be part of a Bioconductor package? >This link >https://rdrr.io/bioc/clusterSeq/src/R/associatePosteriors.R > >suggests that could be

Re: [R] Error pvclust package: Error in hclust(distance, method = method.hclust)

2020-12-14 Thread Peter Langfelder
I don't use pvclust but from a cursory reading and from the error indicating bootstrap I am guessing that pvclust carries out some sort of a sampling of the features on which you cluster. Since you only retain two features (coordinates), the sampling necessarily results in just one feature being re

Re: [R] Weird change in behavior of summary() function

2020-12-14 Thread John Helly via R-help
Follow-up: I find that the problem does not occur on a Linux system, so it is either Mac-specific or some function of the libraries loaded on the problem machine. J. On 12/14/20 12:24, John Helly wrote: Aloha. I have been using the summary function (i.e., summary()) for years and, in the

[R] Error pvclust package: Error in hclust(distance, method = method.hclust)

2020-12-14 Thread Jovani T. de Souza
This question was also made in https://stackoverflow.com/questions/65290436/error-pvclust-package-error-in-hclustdistance-method-method-hclust-must Question: Could you help me resolve the following error: Error in hclust(distance, method = method.hclust) : must have n >= 2 objects to c

Re: [R] Weird change in behavior of summary() function

2020-12-14 Thread John Helly via R-help
Follow-up: I have confirmed that it is something in my local R library such that when I remove /Users/hellyj/Library/R/4.0 the behavior of summary() returns to what I expect. J. > summary(PRISM)     DAUCO Longitude Latitude Precipitation Year  Month  Leng

[R] Weird change in behavior of summary() function

2020-12-14 Thread John Helly via R-help
Aloha. I have been using the summary function (i.e., summary()) for years and, in the last few weeks, suddenly find it behaving in an obviously erroneous way.  I expect the DAUCO summary to be summary of the character variable but it has these weird NULL:00125 values listed for whatever the n

Re: [R] Find the ideal cluster

2020-12-14 Thread Jovani T. de Souza
Thank you so much! Sorry Michael, I will insert in the next. Best regards. [image: Mailtrack] Remetente notificado por Mailtrack

Re: [R] Hello! Problem - function ''matord'' in R

2020-12-14 Thread T. A. Milne via R-help
Might the desired function "matord" be part of a Bioconductor package? This link https://rdrr.io/bioc/clusterSeq/src/R/associatePosteriors.R suggests that could be the case. - T. Arthur Milne __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and

Re: [R] Hello! Problem - function ''matord'' in R

2020-12-14 Thread Bert Gunter
Are you sure you're not thinking of a matlab or some other software's function? (Don't answer... but R has fairly extensive linear algebra capabilities built into its standard distro, and this doesn't sound familiar. I could well be wrong about this, of course). Bert Gunter "The trouble with havi

[R] Hello! Problem - function ''matord'' in R

2020-12-14 Thread Nikolaos Anagnostakis
Hello! I am developing an algorithm via the R program to create phylogenetic trees and calculate values that interest me. On 2019 I had used a function called ''matord'' but I can't find it anymore. Specifically I needed it for calculation of two matrices for CI and RI. Is there anyone who c

[R] [R-pkgs] shinyfilter: 'Excel-like' interdependent column filters in Shiny tables

2020-12-14 Thread joachim
Hello everyone, I have been looking for 'Excel-like' column filters for reactable tables in Shiny, and finally decided to developed this functionality myself. The basic idea is that the selection options available in each column filter of a table depend on the combined selection in all other fil

Re: [R] Help with connection issue for R (just joined, leading R for our agency)

2020-12-14 Thread stephen sefick
Hello, I use ESS everyday for work. If you choose to explore this route, spacemacs configuration files/layers may ease your transition to emacs. Stephen Sefick, PhD On Fri, Dec 11, 2020, 06:25 Jeremie Juste wrote: > > Hello Alejandra, > > || On Tuesday, 8 Dec 2020 at 10:48, Alejandra Barrio Go

Re: [R] Help with connection issue for R (just joined, leading R for our agency)

2020-12-14 Thread Michael Dewey
Just to add to Petr's comment there are other basic editors with syntax highlighting like Notepad++ which are also OK if you want a fairly minimalist approach. Michael On 14/12/2020 08:16, PIKAL Petr wrote: Hallo Alejandra Although RStudio and ESS could help with some automation (each with i

Re: [R] Help with connection issue for R (just joined, leading R for our agency)

2020-12-14 Thread PIKAL Petr
Hallo Alejandra Although RStudio and ESS could help with some automation (each with its own way), using R alone is not a big problem, especially if you are not familiar with Emacs basics and perceiving RStudio issues. I use R with simple external editor - it could be notepad but I could recommend