Re: [R] Problems w/ creating object

Also, recall that on Windows each drive has its own root directory so the meaning of "/some/file" depends on where your working directory is at the moment. E.g., > setwd("C:/tmp") > cat(file="junk.txt",1:10) > file.info("/tmp/junk.txt") size isdir mode mtime

Re: [R] Problems w/ creating object

file.info( "/rsrch1/bcb/kchen_group/v_mohanty/data/TCGA/450K/mapper.txt" ) would tell about the permissions on the file, if it exists (and give NA's if it did not). Bill Dunlap TIBCO Software wdunlap tibco.com On Mon, Apr 22, 2019 at 2:00 PM David Winsemius wrote: > > On 4/22/19 11:49 AM, Sp

Re: [R] Problems w/ creating object

On 4/22/19 11:49 AM, Spencer Brackett wrote: Hello R users, I am trying to create an object out of some data a colleague sent my way, so to duplicate the following code... library(data.table) anno = as.data.frame(fread(file = "/rsrch1/bcb/kchen_group/v_mohanty/data/TCGA/450K/mapper.txt", sep

[R] Problems w/ creating object

Hello R users, I am trying to create an object out of some data a colleague sent my way, so to duplicate the following code... library(data.table) anno = as.data.frame(fread(file = "/rsrch1/bcb/kchen_group/v_mohanty/data/TCGA/450K/mapper.txt", sep ="\t", header = T)) meth = read.table(file = "/rs

Re: [R] Help installing netReg

I updated my rStudio to the newest version. "netReg" is apparently unavailable here but I will try to use another function to generate the regression models I am looking for. Thanks, Spencer On Mon, Apr 22, 2019 at 6:35 AM Jeff Newmiller wrote: > Spoken like someone who hasn't encountered the

Re: [R] problem(s) compiling RWinEdt

On 4/22/2019 2:00 PM, William Dunlap wrote: > Trying adding INSTALL_opts="--no-test-load" to your > install.packages(type="source",...) command.   This package is being > too clever in its .onAttach function. > > Bill Dunlap > TIBCO Software > wdunlap tibco.com > > Thanks -

Re: [R] problem(s) compiling RWinEdt

Trying adding INSTALL_opts="--no-test-load" to your install.packages(type="source",...) command. This package is being too clever in its .onAttach function. Bill Dunlap TIBCO Software wdunlap tibco.com On Mon, Apr 22, 2019 at 9:07 AM Evan Cooch wrote: > [Note: if this should go to one of the

[R] problem(s) compiling RWinEdt

[Note: if this should go to one of the other R maillists, apologies...and let me know *which* other list...] I use the WinEdt editor for ll my TeX work, and several years back, installed the RWinEdt package in R to allow me to use WinEdt as my R edtior as well. Worked, and continues to work,

[R] Help with Rmarkdown HTML Logo

Hello. #RStudio Version 1.1.456 sessionInfo() #R version 3.5.3 (2019-03-11) #Platform: x86_64-w64-mingw32/x64 (64-bit) #Running under: Windows >= 8 x64 (build 9200) I feel I have made great progress teaching myself RMarkdown using HTML reporting for the moment. However, one formatting item elud

Re: [R] Help installing netReg

Spoken like someone who hasn't encountered the nightmare that ensues when some schmuck fails to limit their actions to only updating the system R library while following it. It is straightforward and painless to simply update the user library instead, and so much the better if they don't have Ad

[R] Opportunities for Developing R Packages (Research-Based, Open-Source)

Dear R package community, I am uncertain whether this is appropriate for this mailing list. Please let me know. If not, would you be so kind as to point me in a better direction? I am a mathematics major with a well-developed R experience. I have graduated two years ago and have been working in b

Re: [R] Example for Roxygen @eval tag?

On 22/04/2019 2:40 a.m., Boris Steipe wrote: I see .. you mean code that extends Roxygen. I was thinking something simple like an .Rmd chunk. But just creating an existing tag doesn't do much either: #' @eval sprintf("@section Time: %s", Sys.time() ) Renders as... @eval sprintf("@sectio