Re: [R] Sorting vector based on pairs of comparisons

2019-03-14 Thread Jim Lemon
Hi Pedro, This looks too simple to me, but it seems to work: swap<-function(x,i1,i2) { tmp<-x[i1] x[i1]<-x[i2] x[i2]<-tmp return(x) } mpo<-function(x) { L<-unique(as.vector(x)) for(i in 1:nrow(x)) { i1<-which(L==x[i,1]) i2<-which(L==x[i,2]) if(i2 wrote: > > Dear All, > > This should be

Re: [R] Extract data of special character

2019-03-14 Thread roslinazairimah zakaria
Hi Rui and Ivan, Yes both works well. table(dd$ATTRIBUTE, dd$TRAIT) #or xtabs( ~ ATTRIBUTE + TRAIT, dd) I have another question,I also want to extract all the PCT_SCORE to draw box plot. I have tried to draw box of PCT_SCORE for all attribute scores. boxplot(dd$PCT_SCORE, ylim=c(0,100),

Re: [R] Extract data of special character

2019-03-14 Thread roslinazairimah zakaria
Yes, it does. table(dd$ATTRIBUTE, dd$TRAIT) #or xtabs( ~ ATTRIBUTE + TRAIT, dd) Thank you so much Rui and Ivan. On Fri, Mar 15, 2019 at 5:51 AM Rui Barradas wrote: > Hello, > > Or more simple, > > xtabs( ~ ATTRIBUTE + TRAIT, dd) > > > Hope this helps, > > Rui Barradas > > Às 19:27 de 14/03/201

Re: [R] Display common color scale on multiple scatter3D plots

2019-03-14 Thread Jim Lemon
Hi Luigi, Upon careful reading of the help page, you can do it with scatter3D: scatter3D(X, Y, Z, col.var = Z, pch = 16, cex = 2,clim=c(0.5,3)) scatter3D(X, Y, K, col.var = K, pch = 16, cex = 2,clim=c(0.5,3)) Jim On Thu, Mar 14, 2019 at 9:32 PM Luigi Marongiu wrote: > > Dear all, > I am trying

Re: [R] Extract data of special character

2019-03-14 Thread Rui Barradas
Hello, Or more simple, xtabs( ~ ATTRIBUTE + TRAIT, dd) Hope this helps, Rui Barradas Às 19:27 de 14/03/2019, Ivan Krylov escreveu: On Fri, 15 Mar 2019 03:06:28 +0800 roslinazairimah zakaria wrote: how many of ATTRIBUTE related to TRAITS. The table() function can be used to count occurr

Re: [R] How to list recursive package dependency prior to installation/upgrade of a package

2019-03-14 Thread William Dunlap via R-help
available.packages() and installed.packages() map package names to version and a lot of other things. Bill Dunlap TIBCO Software wdunlap tibco.com On Thu, Mar 14, 2019 at 1:03 PM Sebastien Bihorel < sebastien.biho...@cognigencorp.com> wrote: > That is great! > > Is there a way to know version r

Re: [R] How to list recursive package dependency prior to installation/upgrade of a package

2019-03-14 Thread Sebastien Bihorel
That is great! Is there a way to know version required in the dependent packages? From: "William Dunlap" To: "Sebastien Bihorel" Cc: r-help@r-project.org Sent: Thursday, March 14, 2019 3:50:58 PM Subject: Re: [R] How to list recursive package dependency prior to installation/upgrade of

Re: [R] How to list recursive package dependency prior to installation/upgrade of a package

2019-03-14 Thread William Dunlap via R-help
> tools::package_dependencies("lme4") $lme4 [1] "Matrix""methods" "stats" "graphics" "grid" "splines" [7] "utils" "parallel" "MASS" "lattice" "boot" "nlme" [13] "minqa" "nloptr""Rcpp" "RcppEigen" > tools::package_dependencies("lme4", recursive=TRUE)

Re: [R] Extract data of special character

2019-03-14 Thread Ivan Krylov
On Fri, 15 Mar 2019 03:06:28 +0800 roslinazairimah zakaria wrote: > how many of ATTRIBUTE related to TRAITS. The table() function can be used to count occurrences of each combination of factor levels. Does extracting the two columns by dd[,c('ATTRIBUTE','TRAIT')] and passing the result to table(

[R] How to list recursive package dependency prior to installation/upgrade of a package

2019-03-14 Thread Sebastien Bihorel
Hi Is there an elegant way to recursive list all dependencies of a package prior to its installation or upgrade? I am particularly interested in finding which of the packages currently installed in my test/production environment would require an upgrade prior to actual installation/upgrade of

[R] Extract data of special character

2019-03-14 Thread roslinazairimah zakaria
Hi r-users, I have these data and I would like to count (frequency) how many of ATTRIBUTE related to TRAITS. > dput(dd) structure(list(ID = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4

Re: [R] Unobtainable source code of specific functions

2019-03-14 Thread Ivan Krylov
On Thu, 14 Mar 2019 15:44:07 +0100 (CET) julien.lacr...@student.uliege.be wrote: > My question is therefore the following, how or where could I find > these source code ? (Note : I have the package Igraph installed) Functions wrapped in .Call() are implemented in a compiled language, with corresp

[R] Unobtainable source code of specific functions

2019-03-14 Thread julien . lacroix
Dear all, I currently work on a translation of a cost surface function from R to Python for my dissertation at university. In this context, I have to understand the "AccCost" method (https://rdrr.io/cran/gdistance/src/R/accCost.R). This method calls the function "shortest.paths" among other fun

Re: [R] Rank ANCOVA

2019-03-14 Thread Jackson, Daniel
Thanks I am now in personal communication with Frank anyway! Dan -Original Message- From: peter dalgaard Sent: 14 March 2019 10:37 To: Jackson, Daniel Cc: r-help@r-project.org Subject: Re: [R] Rank ANCOVA 1. This is the R-help mailing list, not "Frank and Dennis" 2. You seem to be refe

Re: [R] Sorting vector based on pairs of comparisons

2019-03-14 Thread William Dunlap via R-help
This is called topological sorting in some circles. The function below will give you one ordering that is consistent with the contraints but not all possible orderings. I couldn't find such a function in core R so I wrote one a while back based on Kahn's algorithm, as described in Wikipedia. > S

Re: [R] Sorting vector based on pairs of comparisons

2019-03-14 Thread Pedro Conte de Barros
Thanks for this. Yes, this is checked before trying to process this. Pedro On 14/03/2019 14.09, Bert Gunter wrote: This cannot be done unless transitivity is guaranteed. Is it? S L a b b c c a Bert On Thu, Mar 14, 2019, 4:30 AM Pedro Conte de Barros mailto:pbar...@ualg.pt>> wrote: Dea

Re: [R] Sorting vector based on pairs of comparisons

2019-03-14 Thread Bert Gunter
This cannot be done unless transitivity is guaranteed. Is it? S L a b b c c a Bert On Thu, Mar 14, 2019, 4:30 AM Pedro Conte de Barros wrote: > Dear All, > > This should be a quite established algorithm, but I have been searching > for a couple days already without finding any satisfact

Re: [R] Sorting vector based on pairs of comparisons

2019-03-14 Thread Richard M. Heiberger
Try this. Anything that appears only in Smaller is candidate for smallest. Among those, order is arbitrary. Anything that appears only in Larger is a candidate for largest. Among those order is arbitrary. Remove rows of matComp containing the already classified items. Repeat with the smaller set

[R] Sorting vector based on pairs of comparisons

2019-03-14 Thread Pedro Conte de Barros
Dear All, This should be a quite established algorithm, but I have been searching for a couple days already without finding any satisfactory solution. I have a matrix defining pairs of Smaller-Larger arbitrary character values, like below Smaller <- c("ASD", "DFE", "ASD", "SDR", "EDF", "ASD")

Re: [R] Rank ANCOVA

2019-03-14 Thread peter dalgaard
1. This is the R-help mailing list, not "Frank and Dennis" 2. You seem to be referring to two posts from July 2010 by Frank Harrell and Dennis Fisher. -pd > On 13 Mar 2019, at 12:06 , Jackson, Daniel > wrote: > > Hi Frank and Dennis > > I am in a similar situation but I would prefer to use

[R] Display common color scale on multiple scatter3D plots

2019-03-14 Thread Luigi Marongiu
Dear all, I am trying to display multivariate data using the library plot3D. I have 3 variables that go on the axis and a fourth that I would like to display as a color shade. However, the scale differs between plots because the data I am using varies. Would be possible to maintain a single scale s