That worked. Thank you, especially for that last one!
So, for others who might encounter this same situation:
1. Install RTools from here:
https://cran.r-project.org/bin/windows/Rtools/Rtools34.exe
Trying to install Rtools from inside RStudio will result in an "it's not
available for 3.4.2" mess
> On Nov 2, 2017, at 3:46 PM, Tiby Kantrowitz wrote:
>
> Thanks. I found that, and installed it and got the same message. Here:
>
> RTools version 3.4
>
> install.packages("fAsianOptions_3010.tar.gz",
I don't see a path to that file's location.
The expansion from pkg_version.tar.gz might be
Thanks. I found that, and installed it and got the same message. Here:
RTools version 3.4
install.packages("fAsianOptions_3010.tar.gz", dependencies=TRUE,
repos=NULL, type = "source")
Installing package into ‘C:/Users/Tlk7/Documents/R/win-library/3.4’ (as
‘lib’ is unspecified) Warning: invalid pa
> On Nov 2, 2017, at 2:14 PM, Tiby Kantrowitz wrote:
>
> Rtools is not available for the current version of R.
Really? If true, I'm surprised and not able to help. I do see an Rtools34.exe
at https://cran.r-project.org/bin/windows/Rtools/
--
David.
>
> What I'm looking for is an alternative
Rtools is not available for the current version of R.
What I'm looking for is an alternative package or how others have managed
to create workarounds.
On Thu, Nov 2, 2017 at 4:25 PM, David Winsemius
wrote:
>
> > On Nov 2, 2017, at 1:09 PM, Tiby Kantrowitz wrote:
> >
> > Yes, that is exactly wh
Hi Petr,
Many thanks for your response.
Basically I want to create a probability matrix to be used in a trinomial tree
going forward. This is the reason why I thought to build the matrix around 0
would be much more efficient. I need to loop through because the probabilities
will depend on my
> On Nov 2, 2017, at 1:09 PM, Tiby Kantrowitz wrote:
>
> Yes, that is exactly what I was doing two days ago.
>
> Warning in install.packages :
> installation of package ‘fAsianOptions_3010.79.tar.gz’ had non-zero exit
> status
>
> Which is what a reading of the explanation for why "prob" wa
Yes, that is exactly what I was doing two days ago.
Warning in install.packages :
installation of package ‘fAsianOptions_3010.79.tar.gz’ had non-zero exit
status
Which is what a reading of the explanation for why "prob" was retired leads
one to expect. Do you have some other suggestion about ho
> On Nov 2, 2017, at 12:07 PM, Tiby Kantrowitz wrote:
>
> Yes. That's the version I've been discussing that has non-zero exit status.
> That situation is why CRAN retired the prob package. It's possible you
> installed that library earlier in development and it's been "carried" along.
> It no
Yes. That's the version I've been discussing that has non-zero exit status.
That situation is why CRAN retired the prob package. It's possible you
installed that library earlier in development and it's been "carried"
along. It no longer installs, now.
The problems with all of this seem to have sta
> On Nov 2, 2017, at 11:15 AM, Tiby Kantrowitz wrote:
>
> The issue is fAsianOptions. Is there a version that works with the latest
> version of R? If not, which version of it works with which version of R and
> where can it be found? I tried several at the archive already.
sessionInfo()
R ve
The issue is fAsianOptions. Is there a version that works with the latest
version of R? If not, which version of it works with which version of R and
where can it be found? I tried several at the archive already.
Alternatively, is there another package that behaves similarly to prob?
On Wed, No
> On Nov 2, 2017, at 10:03 AM, Ed Siefker wrote:
>
> I don't really understand. I mean, I understand the solution is
> print(ggplot(...)). But why is that required in a function and not at
> the console?
The REPL design of the interactive console is offered the user as a
convenience, but I ag
On 02/11/2017 1:03 PM, Ed Siefker wrote:
I don't really understand. I mean, I understand the solution is
print(ggplot(...)). But why is that required in a function and not at
the console?
Shouldn't I be able to rely on what I do at the console working in a
script? Is this inconsistent behavior
FAQ 7.22
Open the file indicated by
system.file("../../doc/FAQ")
and scroll down to 7.22
On Thu, Nov 2, 2017 at 1:03 PM, Ed Siefker wrote:
> I don't really understand. I mean, I understand the solution is
> print(ggplot(...)). But why is that required in a function and not at
> the console?
>
Your output is mangled beyond interpretation.
However, when it comes to interpreting splines in general, you cannot
easily convert the individual beta coefficients into, say HR by
exponenitating them. The collection of beta coefficients describe the
relationship between the continuous variable
Petr et al. :
I only wish to comment on Petr's remark; I have nothing useful to say about
the subject of this thread.
"AFAIK if a function is defined within another function (which is your
case) it cannot be called directly so it is necessary to define it in
global environment."
Right, a deliber
I don't really understand. I mean, I understand the solution is
print(ggplot(...)). But why is that required in a function and not at
the console?
Shouldn't I be able to rely on what I do at the console working in a
script? Is this inconsistent behavior by design?
On Thu, Nov 2, 2017 at 11:54
> On Nov 2, 2017, at 9:27 AM, Ed Siefker wrote:
>
> I have a function:
>
> myplot <- function (X) {
>d <- plotCounts(dds2, gene=X, intgroup="condition", returnData=TRUE)
>png(paste("img/", X, ".png", sep=""))
>ggplot(d, aes(x=condition, y=count, color=condition)) +
>geom_poi
Hi
You have to print it.
just add
print(all ggplot stuff)
inside the function.
Cheers
Petr
> -Original Message-
> From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Ed Siefker
> Sent: Thursday, November 2, 2017 5:27 PM
> To: r-help
> Subject: [R] ggplot inside function d
I have a function:
myplot <- function (X) {
d <- plotCounts(dds2, gene=X, intgroup="condition", returnData=TRUE)
png(paste("img/", X, ".png", sep=""))
ggplot(d, aes(x=condition, y=count, color=condition)) +
geom_point(position=position_jitter(w=0.1,h=0)) +
scale_y_log10
Hi Eric
I did not see any answer and frankly speaking I cannot provide you with canned
help.
AFAIK if a function is defined within another function (which is your case) it
cannot be called directly so it is necessary to define it in global environment.
> fff <- function(x) {
+ myf <- functio
Always reply to the list. I do not do private consulting.
(I have cc'ed this to the list).
I still think this belongs on stackexchange, not r-help. I think you need
to read up on the mathematics of spline bases.
Cheers,
Bert
Bert Gunter
"The trouble with having an open mind is that people kee
Hi all
I am hoping to use the SamplingStrata R package for a dataset describing a
population of businesses wherein I have information on the type of
business, as well as, for designated employment number bands, number of
employees and business turnover information. So ideally the stratification
wi
> On 1 Nov 2017, at 18:03 , Elahe chalabi via R-help
> wrote:
>
> But they row.names() cannot give me the IDs
>
Is "training" extracted from "data" using standard data frame indexing? If so,
data[row.names(training), "ID"] should give you the relevant values.
If not, then you are in troubl
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