[R] Classic fail-safe N

2017-06-25 Thread Naike Wang
Hi all, I was conducting a meta-analysis of single proportions(i.e. without a control group) using the metafor package. When I performed a classic fail-safe N, I noticed that the result (the number of missing studies that would bring p-value to the alpha, to be exact)was different than that I got i

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread PIKAL Petr
Hi Maybe I am missing something but in package "zoo" is function "na.locf", which fills empty cells with previous value. So when you read your file dat<-read.table("", na="") you can use library(zoo) sapply(dat, na.locf) the only problem is that it changes factors to numeric representati

Re: [R] Request for help - adding text files to a data frame

2017-06-25 Thread David Winsemius
> On Jun 25, 2017, at 7:35 PM, Bhaskar Mitra wrote: > > Hello Everyone, > > I have a data frame which looks something like this: > >V1 <-c(1,2,3) >V2 <-c(5,6,7) >V3 <-c(9,10,11) > > df <- data.frame(V1,V2,V3) > > I want to add couple of text files at the beginning of df and s

Re: [R] Request for help - adding text files to a data frame

2017-06-25 Thread Bert Gunter
You appear to either be ignorant of the structure pf data frames or have not expressed yourself clearly enough (for me, anyway). Please go through a tutorial to learn about the fixed structure of data frames, for which your request does not appear to reflect an understanding. Cheers, Bert Bert G

Re: [R] How to code the factor for ANOVA

2017-06-25 Thread Bert Gunter
You really really need to go through one of the many R (web) tutorials where this is discussed in detail. Or see the Intro to R tutorial that ships with R. This is not the proper venue for learning how R handles linear models and how its formula interface works. A terse treatment can be found in ?l

Re: [R] Help please

2017-06-25 Thread Bert Gunter
On Sun, Jun 25, 2017 at 5:29 PM, Jim Lemon wrote: > Hi Rabby, > Before you run your regression, try this: > > is.factor(Final$Cor) > > If this returns TRUE, then this variable is a factor and it will be > treated as a number of levels rather than a set of numeric values. > This usually happens whe

[R] Request for help - adding text files to a data frame

2017-06-25 Thread Bhaskar Mitra
Hello Everyone, I have a data frame which looks something like this: V1 <-c(1,2,3) V2 <-c(5,6,7) V3 <-c(9,10,11) df <- data.frame(V1,V2,V3) I want to add couple of text files at the beginning of df and save the df as a csv file. The csv file should look something like this:

[R] How to code the factor for ANOVA

2017-06-25 Thread Jinsong Zhao
Hi there, I have a experimental design related question. I have done a experiment with 3 factors. The design matrix is similar to: data.frame(Factor.1 = rep(rep(0:2, each = 3),3), Factor.2 = rep(c("U","S","N"), 9), Factor.3 = rep(0:2, each = 9)) Factor.1 Factor.2 Factor.3 1 0

Re: [R] Help please

2017-06-25 Thread Jim Lemon
Hi Rabby, Before you run your regression, try this: is.factor(Final$Cor) If this returns TRUE, then this variable is a factor and it will be treated as a number of levels rather than a set of numeric values. This usually happens when a text file is read in and there is at least one value that can

Re: [R] rJava Broken on Linux + R 3.4

2017-06-25 Thread Jeff Newmiller
I can't think of a more appropriate time to point out that there is an r-sig-debian mailing list that focuses on operating-system-related issues like this. -- Sent from my phone. Please excuse my brevity. On June 25, 2017 6:47:10 PM EDT, Lorenzo Isella wrote: >Dear All, >I think there is some

Re: [R] Writing my 3D plot function

2017-06-25 Thread Jeff Newmiller
Please look at what I see in your code below (run-on code mush) to understand part of why it is important for you to send your email as plain text as the Posting Guide indicates. You might find [1] helpful. [1] https://wiki.openstack.org/wiki/MailingListEtiquette -- Sent from my phone. Please

[R] Classic fail-safe N

2017-06-25 Thread Naike Wang
Hi all, I was conducting a meta-analysis of single proportions(i.e. without a control group) using the metafor package. When I performed a classic fail-safe N, I noticed that the result (the number of missing studies that would bring p-value to the alpha, to be exact)was different than that I got i

[R] rJava Broken on Linux + R 3.4

2017-06-25 Thread Lorenzo Isella
Dear All, I think there is something wrong with rJava on any Debian based distribution. I may be wrong, but I experiencing exactly the problems mentioned at https://github.com/amattioc/SDMX/issues/130 and at https://github.com/s-u/rJava/issues/110 A couple of packages (RJSDMX and xlsx) are now

Re: [R] vertical semi-circles in R

2017-06-25 Thread Jim Lemon
Hi Eliza, How about this: library(plotrix) plot(0,type="n") draw.arc(rep(0,6),seq(0.1,0.6,by=0.1),radius=0.05, angle1=3*pi/2,angle2=5*pi/2) Jim On Sun, Jun 25, 2017 at 9:34 PM, Eliza B wrote: > Dear useRs, > > > I am to teach my students some drawing techniques in R. I started shape of an > h

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Jim Lemon
That's the kind of help that we like to provide. And for extra marks, you can write a small function that will deal with consecutive NA values. Jim On Mon, Jun 26, 2017 at 1:25 AM, Christophe Elek wrote: > Perfect Jim, that Is exactly what I needed – let me check that ... > > Cheers > > > > *Fr

Re: [R] Help to organize data

2017-06-25 Thread Mitchell Maltenfort
The tidyverse also has nice functions On Sun, Jun 25, 2017 at 5:48 PM Sarah Goslee wrote: > This is pretty badly mangled (please don't post in html), but > ?aggregate > is probably what you want. > > Sarah > > On Sun, Jun 25, 2017 at 5:27 PM, Jackson Rodrigues > wrote: > > Hi everybody, > > > >

Re: [R] Help to organize data

2017-06-25 Thread Sarah Goslee
This is pretty badly mangled (please don't post in html), but ?aggregate is probably what you want. Sarah On Sun, Jun 25, 2017 at 5:27 PM, Jackson Rodrigues wrote: > Hi everybody, > > My name is Jackson and come here ask for a help to organize data. > I really need help from you. I have several

[R] Help to organize data

2017-06-25 Thread Jackson Rodrigues
Hi everybody, My name is Jackson and come here ask for a help to organize data. I really need help from you. I have several data sets to organize. I have to summarize precipitation data collected in different days and months in only one table. However, those data are disperse in days and times. T

[R] Writing my 3D plot function

2017-06-25 Thread Alaios via R-help
Hi all,I had a question last week on asking for a function that will help me draw three different circles on x,y,z axis based on polar coordinates (Each X,Y,Z circle are coming from three independent measurements of 1-360 polar coordinates). It turned out that there  is no such function in R and

Re: [R] vertical semi-circles in R

2017-06-25 Thread Rui Barradas
I forgot to mention that a circle with radius 0.05 cannot go from (0,0.6) to (0,0.1), that's why I've changed the radius to 0.25, half the distance between those points. I also chose the center point. Rui Barradas Em 25-06-2017 19:45, Rui Barradas escreveu: Hello, I'm not the greatest graphi

Re: [R] vertical semi-circles in R

2017-06-25 Thread Rui Barradas
Hello, I'm not the greatest graphics programmer but is this it? #install.packages("shape") library(shape) # for function plotcircle plot(0,0,col="white") segments(0,0,0.3,0.3) segments(0.3,0.4,0.3,0.3) segments(0.3,0.4,0,0.7) segments(0,0.7,0,0.6) segments(0,0.0,0,0.1) plotcircle(r = 0.25, m

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Christophe Elek
Excellent Boris, thx – this helps From: Boris Steipe Sent: June 25, 2017 11:23 AM To: Christophe Elek Cc: r-help@r-project.org Subject: Re: [R] Fill in empty cell in data.frame from previous value Run it through a loop. I assume the cell contents is NA (Not Available). Test for it with is.na().

[R] vertical semi-circles in R

2017-06-25 Thread Eliza B
Dear useRs, I am to teach my students some drawing techniques in R. I started shape of an handle by using the following codes; >plot(0,0,col="white") >segments(0,0,0.3,0.3) >segments(0.3,0.4,0.3,0.3) >segments(0.3,0.4,0,0.7) >segments(0,0.7,0,0.6) >segments(0,0.0,0,0.1) The coding will dr

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Christophe Elek
Perfect Jim, that Is exactly what I needed – let me check that ... Cheers From: Jim Lemon Sent: June 25, 2017 3:11 AM To: Christophe Elek Cc: r-help@r-project.org Subject: Re: [R] Fill in empty cell in data.frame from previous value Hi Chris, You may know about the *apply family of functions. Th

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Göran Broström
> library(tidyr) > ?fill Göran On 2017-06-24 19:49, Christophe Elek wrote: Hello Total newbie here... I hope I read the guide properly I have the following data.frame (I read it from a CSV file I cannot change) names val 1 Mandy 1 2 2 3 John2 4 2 I want to read the r

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Boris Steipe
Run it through a loop. I assume the cell contents is NA (Not Available). Test for it with is.na(). Whenever that returns TRUE, replace the NA value with the value from the previous row. Cheers, B. > On Jun 24, 2017, at 1:49 PM, Christophe Elek > wrote: > > Hello Total newbie here... I hope

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Bert Gunter
You need to go through some tutorials, not expect us to tutor you here. That is not the purpose of this list (although we do some of this indirectly of course). There are many good online tutorials -- search or see here: https://www.rstudio.com/online-learning/#R . Or start by going through the I

Re: [R] Help please

2017-06-25 Thread Jim Lemon
Hi Rabby, It looks to me as though your variable Final$Cor is being treated as a factor rather than a numeric value. This may be due to one or more non-numeric values occurring in the data that is read in. Also you do not have to use the Final$* notation in the formula as you have specified the dat

Re: [R] Fill in empty cell in data.frame from previous value

2017-06-25 Thread Jim Lemon
Hi Chris, You may know about the *apply family of functions. These slice various data structures and "apply" a specified function to each slice, usually returning a list of return values. As far as I am aware, you can't access adjacent rows unless you reformat the data structure. There is a way to