Re: [R] Help with the plot function

2017-06-19 Thread PIKAL Petr
Hi You are quite close. With slight modification of your code: par(mfrow = c(2, 1)) par(cex = 0.6) par(mar = c(0, 0, 0, 0), oma = c(4, 4, 0.5, 0.5)) par(tcl = -0.25) par(mgp = c(2, 0.6, 0)) plot(BUD~YEAR, type="o", ann=F, axes=F, pch=19, ylim=c(60,100),data=g1) axis(4, las=2) mtext("Bud Break (J

Re: [R] Help with the plot function

2017-06-19 Thread André Luis Neves
Hi, Bert: Yes, I studied the functions you suggested, but I didn't get to adapt it to my example whose reproducible code I sent in my first email. Here it is the code of the functions I studies: ## par par(mfrow = c(2, 3)) par(cex = 0.6) par(mar = c(3, 3, 0, 0), oma = c(1, 1, 1, 1)) for (i in 1:6

Re: [R] Help with the plot function

2017-06-19 Thread Bert Gunter
1. Did you study the functions (esp. ?layout) to which I referred you? 2. Show us your code! -- "to no avail" is meaningless! -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom Co

Re: [R] Help with the plot function

2017-06-19 Thread André Luis Neves
I'm trying to recreate a graph similar to the last one found on this link: https://sites.ualberta.ca/~lkgray/uploads/7/3/6/2/7362679/6c_-_line_plots_with_error_bars.pdf The difference is that I want budbreak on the top, and the temperatures at the bottom. I tried to set par before each graph and

Re: [R] Help with the plot function

2017-06-19 Thread Bert Gunter
See ?layout ?split.screen ?par (the mfrow and mfcol values) depending exactly on what you want to do and how you want to do it. Essentially, these all allow you to make separate plots at different regions of the device. Cheers, Bert Bert Gunter "The trouble with having an open mind is tha

[R] Help with the plot function

2017-06-19 Thread André Luis Neves
Dear friends, I have the following dataframe: YEAR <- c(1996 , 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004 ) T_MAR <- c(2.8, 6.5, 5.4,2.4, 4, 4.1, 3, 4.4, 4.5) T_APR <- c(5.7, 7.8, 7.7, 4.6, 4.7, 6.2,5.7, 5.9, 7) T_MAY <- c(7, 8.8, 10, 6, 5.5, 7.6, 8.5, 7.3, 10.2) BUD <- c(87, 98, 93, 85, 89,

Re: [R] mixed models lmer function help!!

2017-06-19 Thread Bert Gunter
1. A mess, because you failed to read and follow the posting guide: This is a **plain text** mailing list, which means that html can get mangled, as you have demonstrated. 2. And wrong list: the r-sig-mixed-models list is where this would be more suitable. Cheers, Bert Bert Gunter "The trouble

Re: [R] How to Transform a Factor Variable into a Date

2017-06-19 Thread David L Carlson
The R list does not recognize .csv files so your attachment got stripped. It is picky that way. Tacking .txt to the end might trick it into preserving the attachment. Dataset <- read.table() created a data.frame called Dataset so the second command was redundant. Probably better would be read.

Re: [R] How to Transform a Factor Variable into a Date

2017-06-19 Thread Rui Barradas
Hello, Another way of getting dates, of class 'Date', is to paste a day "01" into what the op has. To the op: 1) Your attachment didn't come through, R-Help doesn't accept the extension .csv, use .txt 2) When you read your data in using function read.csv the result already is a data.frame so

Re: [R] How to Transform a Factor Variable into a Date

2017-06-19 Thread Christopher W Ryan
A couple thoughts: 1. converting factors into dates often requires that they be converted to character first. 2. you don't really have dates; you have just months and years 3. therefore perhaps the as.yearmon() function in the zoo package could help library(zoo) my.factor <- factor("Feb 2017")

Re: [R] write.dna command

2017-06-19 Thread William Michels via R-help
Hi Mogjib, Does the following solve your issue? > setwd(WD) On Sat, Jun 17, 2017 at 7:26 AM, Mogjib Salek wrote: > Hi all, > > I am learning R by "doing". And this is my first post. > > I want to use R: 1- to fetch a DNA sequence from a databank (see bellow) > and 2- store it as FASTA file.

[R] mixed models lmer function help!!

2017-06-19 Thread Shelby Leonard via R-help
Hi,I have tumor growth curve data for a bunch of different mice in various groups. I want to compare the growth curves of the different groups to see if timing of drug delivery changed tumor growth.I am trying to run a mixed models with repeated measures over time with each mouse as a random eff

Re: [R] quantreg::rq.fit.hogg crashing at random

2017-06-19 Thread Madison Lincoln
Dear all, I am using the "rq.fit.hogg" function from the "quantreg" package. I have two problems with it. First (less importantly), it gives an error at its default values with error message "Error in if (n2 != length(r)) stop("R and r of incompatible dimension") : argument is of length zero". I

[R] How to Transform a Factor Variable into a Date

2017-06-19 Thread Paul Bernal
Dear all, Hope you are doing great. I have a .csv file that I read into R, the .csv file consistss of two fields (TransitDate and CargoTons). The TransitDate I formatted from Excel in the fashion mmm-yy (e.g.: Apr-2013). However R does not recognize the field TransitDate as a date field. Here is