Re: [R] R logo size in package information

2016-03-29 Thread Marc Girondot via R-help
Le 30/03/2016 06:18, Jeff Newmiller a écrit : You are not clarifying yet. If this requires RStudio to reproduce then this question doesn't belong here. I am not yet convinced that RStudio IS required, but every time you mention it the water gets muddier. I try to be shorter: There is bad inter

Re: [R] R logo size in package information tab of Rstudio

2016-03-29 Thread Jeff Newmiller
You are not clarifying yet. If this requires RStudio to reproduce then this question doesn't belong here. I am not yet convinced that RStudio IS required, but every time you mention it the water gets muddier. -- Sent from my phone. Please excuse my brevity. On March 29, 2016 9:07:49 PM PDT, Ma

Re: [R] R logo size in package information tab of Rstudio

2016-03-29 Thread Marc Girondot via R-help
Here are my R session information: > sessionInfo() R version 3.3.0 alpha (2016-03-24 r70373) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under: OS X 10.11.4 (El Capitan) locale: [1] fr_FR.UTF-8/fr_FR.UTF-8/fr_FR.UTF-8/C/fr_FR.UTF-8/fr_FR.UTF-8 If the help is displayed within the R gui u

[R] Filtering based on the occurrence

2016-03-29 Thread Farnoosh Sheikhi via R-help
Hello,  I have a data set similar to below and I wanted to keep the observations after the first occurrence of these department: "B", "D", "F".For example for ID=2, the observation with deps=B and anything after will be kept in the data. For ID=3, observations with deps=D and anything after will

[R] Compute the Gini coefficient

2016-03-29 Thread Marine Regis
Hello, I would like to build a Lorenz curve and calculate a Gini coefficient in order to find how much parasites does the top 20% most infected hosts support. Here is my data set: Number of parasites per host: parasites = c(0,1,2,3,4,5,6,7,8,9,10) Number of hosts associated with each number of

Re: [R] Accented characters, windows

2016-03-29 Thread Duncan Murdoch
On 29/03/2016 5:39 PM, Jan Kacaba wrote: I have problem with accented characters. My OS is Win 8.1 and I'm using RStudio. I make string : av="ěščřž" When I call "av" I get result bellow. av [1] "ìšèøž" The resulting characters are different. I have similar problem when I write string to a fi

Re: [R] R logo size in package information tab of Rstudio

2016-03-29 Thread Duncan Murdoch
On 29/03/2016 3:42 PM, Marc Girondot via R-help wrote: Two different sizes of R logo are shown in Rstudio in the Help at the package level. For example, numderiv shows a nice discreet logo located at (in MacosX): /Library/Frameworks/R.framework/Versions/3.3/Resources/doc/html/logo.jpg whereas pa

[R] Convergence issues when using ns splines (pkg: spline) in Cox model (coxph) even when changing coxph.control

2016-03-29 Thread Jennifer Wu, Miss
Hi, I am currently using R v3.2.3 and on Windows 10 OS 64Bit. I am having convergence issues when I use coxph with a interaction term (glarg*bca_py) and interaction term with the restricted cubic spline (glarg*bca_time_ns). I use survival and spline package to create the Cox model and cubic sp

[R] Accented characters, windows

2016-03-29 Thread Jan Kacaba
I have problem with accented characters. My OS is Win 8.1 and I'm using RStudio. I make string : av="ěščřž" When I call "av" I get result bellow. > av [1] "ìšèøž" The resulting characters are different. I have similar problem when I write string to a file. In RGUI if I call "av" it prints charac

Re: [R] How to solve an NLME problem?

2016-03-29 Thread Ben Bolker
David C Blouin lsu.edu> writes: > I have a nonlinear model where I want to include random > coefficients for a sample of random SUBJECTS. The fixed effects part > of the model is Y ~ B + (T - B) / (1 + 10**(X - C)) and I would like > to include random coefficients b for B, t for T, and c for C.

Re: [R] [FORGED] help in maximum likelihood estimation

2016-03-29 Thread Jeff Newmiller
The R software is a product of many individuals contributions... when you implement that function please contribute it. Until then, a little more effort on your part really is needed to convey your problem clearly... the usual standard of clarity is a minimal reproducible example. Discussions

[R] Total Least Squares Regression

2016-03-29 Thread Lorenzo Isella
Dear All, I am looking for an R package to handle total least square regression (TLS). See http://bit.ly/1pSf4Bg I am in a situation in which I have errors in both the dependent variables X (plural because I have several predictors) and the independent variable y. I found several discussion insi

[R] R logo size in package information tab of Rstudio

2016-03-29 Thread Marc Girondot via R-help
Two different sizes of R logo are shown in Rstudio in the Help at the package level. For example, numderiv shows a nice discreet logo located at (in MacosX): /Library/Frameworks/R.framework/Versions/3.3/Resources/doc/html/logo.jpg whereas packrat shows a huge logo located at: /Library/Frameworks

Re: [R] [FORGED] help in maximum likelihood estimation

2016-03-29 Thread heba eldeeb via R-help
Dear Rolf I wish this function is written as soon as possible to know how anyone spend time to reply as you did Thanks On Tuesday, March 29, 2016 9:07 PM, Heba wrote: Dear Rolf I wish this function is written as soon as possible to know how anyone spend time to reply as you did Than

Re: [R] help in maximum likelihood estimation

2016-03-29 Thread Marc Girondot via R-help
Le 28/03/2016 22:19, heba eldeeb via R-help a écrit : Dear AllI'm trying to find the maximum likelihood estimator of a certain distribution using nlm command but I receive an error as: non-finite value supplied by 'nlm' can't figure out what is wrong in my function Any help? Thank you in ad

Re: [R] Export the result k-means cluster to CSV file

2016-03-29 Thread S Ellison
> i am confusing about your code , i can not get the the desired result . can > you > more clear for the code? The code I suggested just provided a structured text output of the kmeans object. If you want a cluster-by-cluster output of the original data, you will need to write a function that

Re: [R] Can forecasting is possible through R Studio on the basis of past experience of data

2016-03-29 Thread Bert Gunter
You should have first searched the RStudio website, where you would have found: https://www.rstudio.com/online-learning/#R Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom

Re: [R] Can forecasting is possible through R Studio on the basis of past experience of data

2016-03-29 Thread Boris Steipe
R Studio is basically a wrapper for R. To find out more about how to work with R, just use Google. Or, for a more focussed experience, navigate to www.rseek.org B. On Mar 29, 2016, at 11:37 AM, Prasad Kale wrote: > Hi All, > > I am very new to the R. I just want to ask whether through R St

[R] Can forecasting is possible through R Studio on the basis of past experience of data

2016-03-29 Thread Prasad Kale
Hi All, I am very new to the R. I just want to ask whether through R Studio can I able to build forecasting module. Means on the basis of past experience can I able to predict future trend. To start up can you please provide me any useful links or documents so by referring this i will try at my

[R] [R-pkgs] New R package for K-S goodness-of-fit tests

2016-03-29 Thread Novack-Gottshall, Philip M.
Greetings, We wanted to announce a new R package 'KScorrect' that carries out the Lilliefors correction to the Kolmogorov-Smirnoff test for use in (one-sample) goodness-of-fit tests. It's well-established it's inappropriate to use the K-S test when sample statistics are used to estimate parame

[R] How to solve an NLME problem?

2016-03-29 Thread David C Blouin
I have a nonlinear model where I want to include random coefficients for a sample of random SUBJECTS. The fixed effects part of the model is Y ~ B + (T - B) / (1 + 10**(X - C)) and I would like to include random coefficients b for B, t for T, and c for C. The model is a fairly well-known three-p

Re: [R] converting a class dataframe (chars) to transaction class

2016-03-29 Thread Giorgio Garziano
mydf <- data.frame(d1 = LETTERS[1:10], d2 = letters[11:20]) > str(mydf) 'data.frame': 10 obs. of 2 variables: $ d1: Factor w/ 10 levels "A","B","C","D",..: 1 2 3 4 5 6 7 8 9 10 $ d2: Factor w/ 10 levels "k","l","m","n",..: 1 2 3 4 5 6 7 8 9 10 > library(arules) trans1 <- as(mydf, "transaction

Re: [R] How to form groups for this specific problem?

2016-03-29 Thread Adams, Jean
You're welcome, Satish. Yes, questions that are seeking solutions in R code are appropriate for this group. It's helpful if you provide sample data (for example, using dput()) and sample R code that folks can use. And it's helpful if you show the results that you are hoping to achieve (as you di

Re: [R] how can I count data points outside the main plot line?

2016-03-29 Thread Giorgio Garziano
As a "quick solution", I would explore the use of stat_smooth() and then extract fit data from, as herein shown: library(ggplot2) p <- qplot(hp, wt, data=mtcars) + stat_smooth(method="loess") p ggplot_build(p)$data[[2]] xy ymin ymaxse PANEL group colour fill

Re: [R] Performance Analytics Modigliani Code help

2016-03-29 Thread Jim Lemon
Hi Jessy, I had a look at: http://www.rdocumentation.org/packages/PerformanceAnalytics/functions/Modigliani and it doesn't include a "Value" section, so I don't know what the return value should be. Have you tried running the examples to see what they return? Jim On Sat, Mar 26, 2016 at 12:10 A

Re: [R] how can I count data points outside the main plot line?

2016-03-29 Thread PIKAL Petr
Hi Did you try residuals and/or influence.measures? Cheers Petr -Original Message- From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of raz Sent: Tuesday, March 29, 2016 10:51 AM To: r-help@r-project.org Subject: [R] how can I count data points outside the main plot line? Ho

[R] how can I count data points outside the main plot line?

2016-03-29 Thread raz
How can I count data points that lay outside of the main plot line? I have a plot in which most data points create a sigmoid line, but some are spread throughout the plot area, these points dont fit the curve. I would like to count them to know the ratio between the main curve and the data points t