Re: [R] Problem with "different" proj4string that are actually identical

2015-03-20 Thread MacQueen, Don
Hmm, that does complicate things. Since the error message references "join(pts, ta)" I think you're going to have to find out more about this join() function and how niche.test() constructs the arguments that it passes to join(). Starting with traceback() immediately after getting the error mig

Re: [R] Problem with "different" proj4string that are actually identical

2015-03-20 Thread Hemery, Lenaig
Dear Don, Thanks for your answer. proj4string(spCro) == proj4string(paramdf), as well as identical(proj4string(spCro), proj4string(paramdf)), returns a TRUE so I forced them to be identical as you suggested, and repeated the niche.test(), but I got the same error message. Would you have any oth

Re: [R] not a Stata version 5-12 .dta file

2015-03-20 Thread Nicole Ford
Everything is perfect and working as it should-- thanks, Anthony! >>> >>> >>> >>> >>> On Mar 19, 2015, at 9:09 PM, Anthony Damico wrote: hi nicole, i have published easy to reproduce, well-documented code to download and then analyze every file from every wave of the wo

[R] ordering a boxplot

2015-03-20 Thread Antonio Silva
Hello I'm using a dataframe (mydata) where row names are sampling points and column names are species in a multivariate analysis. If I write boxplot(mydata) I'll have boxplots for each species abundance in alphabetical order. How to get the boxes orderer by the median? Usually for this I write

Re: [R] Problem with "different" proj4string that are actually identical

2015-03-20 Thread MacQueen, Don
This question would be better asked on r-sig-geo. Here are some things to try (type at the R prompt): proj4string(spCro) == proj4string(paramdf) Does it return TRUE or FALSE? Or, instead of using summary(), directly inspect the proj4strings: proj4string(spCro) proj4string(paramdf) If th

Re: [R] mboost: Proportional odds boosting model - how to specify the offset?

2015-03-20 Thread Benjamin Hofner
Dear Madlene, the problem that you observed was twofold. First, mboost expects the offset to be a scalar or a vector with length equal to the number of observations. However, fitted(p.iris) is a matrix. In PropOdds(), the linear or additive predictor is shared among all outcome categories and

Re: [R] not a Stata version 5-12 .dta file

2015-03-20 Thread Nicole Ford
Anthony, I was able to d/l all of the files over night. I will let you know off-list of any issues. Thanks! ~Nicole Ford Sent from my iPhone > On Mar 20, 2015, at 12:09 AM, Anthony Damico wrote: > > doesn't just running this solve your problem? > > https://github.com/ajdamico/usgsd/blob/

[R] [R-pkgs] The 'atsd' package released.

2015-03-20 Thread mikhail.zvagelsky
Dear R users, I would like to announce the release of the "atsd" R package on CRAN, which offers functions for retrieving time-series and related meta-data such as entities, metrics, and tags from Axibase Time Series Database (ATSD). http://cran.r-project.org/web/packages/atsd/index.html ATSD

Re: [R] Why do my posts not get accepted to the mailing list?

2015-03-20 Thread John Kane
Perhaps post directly to the R-help list and don't use nabble? John Kane Kingston ON Canada > -Original Message- > From: andrejfa...@ml1.net > Sent: Thu, 19 Mar 2015 14:26:59 -0400 > To: r-help@r-project.org > Subject: [R] Why do my posts not get accepted to the mailing list? > > Greeti

[R] .dtf files

2015-03-20 Thread Helf, Kurt
All Is R able to read ".dtf" files, such as data downloaded from HOBO dataloggers, or do the files need to be converted to ".txt" or ".csv" format? Cheers Kurt -- *** Kurt Lewis Helf, Ph.D. Ecologist EEO Counselor/Mediator National

Re: [R] not a Stata version 5-12 .dta file

2015-03-20 Thread jwd
On Thu, 19 Mar 2015 15:00:18 -0400 Nicole Ford wrote: > Hello, > > I recently updated to the newest version of R and I am encountering > issues. Please find my error and session info below. My data are > attached. I have tried the readstata13 package just in case to no > avail. Unless I am m