Re: [R] Two x axes - top and bottom

2014-02-08 Thread Jim Lemon
On 02/09/2014 09:57 AM, Benjamin Ward (ENV) wrote: Hi, fellow R users, I've been asked to make a plot with two datasets each with a different x axis, and it's been suggested one be at the top and the other at the bottom of the graph. I normally use ggplot2, and I know how to plot multiple data

Re: [R] Output including listing and graphs.

2014-02-08 Thread Greg Snow
As previously mentioned, the knitr package and related work well if you have a script that you want to run. If you want a basic R script without worrying much about markup then I suggest looking at the spin and stitch functions in the knitr packge. If on the other hand you do not have a script pr

[R] subset of data frame

2014-02-08 Thread Yuanzhi Li
Hi, everyone I met a small problem when I want take a subset from a data frame. The data frame(x) looks like the followings(10 species with 3 measured traits): Species trait1trait2 trait3 sp1 sp1 ... sp2 sp2 ... sp10 sp10 ... It would be easy if we want trait values for most abu

[R] subset of data frame

2014-02-08 Thread Yuanzhi Li
Hi, everyone I met a small problem when I want take a subset from a data frame. The data frame(x) looks like the followings(10 species with 3 measured traits): Species trait1trait2 trait3 sp1 sp1 ... sp2 sp2 ... sp10 sp10 ... It would be easy if we want trait values for most abu

[R] Two x axes - top and bottom

2014-02-08 Thread Benjamin Ward (ENV)
Hi, fellow R users, I've been asked to make a plot with two datasets each with a different x axis, and it's been suggested one be at the top and the other at the bottom of the graph. I normally use ggplot2, and I know how to plot multiple datasets by simply + a new geom with a different data op

[R] running Rstudio on public server using putty

2014-02-08 Thread Qike Li
Hi All, I am trying to set up Rstudio to let it run on my university's High Performance Computing services (HPC). I use putty to access HPC. Anyone knows if Rstudio can do that? If so, how can I set it up? Thanks, Qike [[alternative HTML version deleted]] ___

Re: [R] Output including listing and graphs.

2014-02-08 Thread Duncan Murdoch
On 14-02-08 7:58 PM, John Sorkin wrote: R 3.0.0 or RStudio 0.98.490 Windows 7 (or Linux Mint) Is there any easy way to run an R program and have it produce text output in a file along with any graphs that the code produces? I know I can run the program and paste the graphs into the output how

Re: [R] Output including listing and graphs.

2014-02-08 Thread Jim Lemon
On 02/09/2014 11:58 AM, John Sorkin wrote: R 3.0.0 or RStudio 0.98.490 Windows 7 (or Linux Mint) Is there any easy way to run an R program and have it produce text output in a file along with any graphs that the code produces? I know I can run the program and paste the graphs into the output

[R] Output including listing and graphs.

2014-02-08 Thread John Sorkin
R 3.0.0 or RStudio 0.98.490 Windows 7 (or Linux Mint) Is there any easy way to run an R program and have it produce text output in a file along with any graphs that the code produces? I know I can run the program and paste the graphs into the output however doing this is rather time consuming

Re: [R] Count observation based on hour

2014-02-08 Thread arun
Hi, Try: #using the same `data`  res1 <- as.data.frame(table(with(dat,cut(Date,breaks=seq(as.POSIXct("2013-01-01 00:00:00"),max(Date)+3600,by='1 hour') A.K. Hi A.K. Thank you very much! It worked!!  Just another quick follow-up question: res <- as.data.frame(table( with(dat,cut(Dat

Re: [R] Plotting a loess line when the abcissa variable has numerous NA's

2014-02-08 Thread David Winsemius
On Feb 8, 2014, at 12:28 PM, David Parkhurst wrote: > I have a situation in which I want to plot a variable Y against X, and then > to add a loess line to that plot. My X variable is 366 elements long, and > about 1/3 are NA's, scattered through the list. None of the corresponding > Y's are

[R] Plotting a loess line when the abcissa variable has numerous NA's

2014-02-08 Thread David Parkhurst
I have a situation in which I want to plot a variable Y against X, and then to add a loess line to that plot. My X variable is 366 elements long, and about 1/3 are NA's, scattered through the list. None of the corresponding Y's are NA's. Everything I’ve tried so far, by mimicking examples fr

Re: [R] Trouble with pmvnorm?

2014-02-08 Thread peter dalgaard
You almost said it yourself: Your integrand doesn't vectorize. The direct culprit is the following: If x is a vector, what is lower=c(x,x,x,x)? A vector of length 4*length(x). And pmvnorm doesn't vectorize so it wouldn't help to have lower= as a matrix (e.g., cbind(x,x,x,x)) instead. A straig

[R] (no subject)

2014-02-08 Thread Ma Rw
Hai I'm working on a allatent profile in continuous data but I don't know what a directive. I know the special alatent class poLCA package but what package your latent profile thank you [[alternative HTML version deleted]] __ R-help@r-project

Re: [R] creating an equivalent of r-help on r.stackexchange.com ? (was: Re: Should there be an R-beginners list?)

2014-02-08 Thread Liviu Andronic
On Sat, Feb 8, 2014 at 4:41 AM, Patrick Connolly wrote: > |> Dear Don and Bert, > |> Allow me to address some of your concerns below. > > Which you do very clearly by positioning your responses underneath > what you're commenting on. That doesn't seem to be possible on SE. > In addition to Yihui'