Oh, haha -- sorry for the vagueness:
I was expecting to get the comparison to work. I also didn't mention that the
dataset is much larger; I just wanted to give the first few rows.
So, basically, I have a bunch of times in three columns, and I'm looking to
compare them in which the command wor
Hi, I am trying to run several types of time series/statistical analysis on
large data sets of irregularly spaced time series. So far I have been
playing around with zoo, but for large data sets I run into memory problems.
Is there any package that offers support for such analysis? Or you think
big
Thank you.. I cant imagine that I missed the most obvious route from my
attempt!
Regards
Vijayan Padmanabhan
"What is expressed without proof can be denied without proof" - Euclide.
Uwe Ligges
02/27/2012 12:57 PM
To
Vijayan Padmanabhan
cc
"R. Michael Weylandt" , r-help@r-project.org
Su
I wonder why nobopdy suggested to run
install.packages("HH")
since the binary is in the 2.12 repository on CRAN:
CRAN-mirror/bin/windows/contrib/2.12/
Uwe Ligges
On 27.02.2012 07:30, Vijayan Padmanabhan wrote:
Dear Michael
I found an alternate way that was useful at least in this case.
Tr
Dear Michael
I found an alternate way that was useful at least in this case.
Trust someone would benefit from a similar approach in the RGroup when
they face a similar problem as mine by following this approach.
I saved the tar.gz file of package HH, corresponding to the R version of
mine in a
I believe you'll have to build it yourself from the sources (in the
tarball) - or perhaps find some kind soul who's willing to - the official
repositories don't support a version that's about to be 18months out of
date.
Michael
On Mon, Feb 27, 2012 at 1:12 AM, Vijayan Padmanabhan
wrote:
>
> Dear
Dear Michael
I checked this link.. the archives shown here are all tar.gz versions.
I am looking for a zip archive, to install on my windows XP installation
of R 2.12.0.
pl help if you have the link to windows archives.
Thanks
Regards
Vijayan Padmanabhan
"What is expressed without proof can be
Old sources are available here:
http://cran.r-project.org/src/contrib/Archive/HH/
You'll have to see which ones are compatible
Michael
On Mon, Feb 27, 2012 at 1:02 AM, Vijayan Padmanabhan
wrote:
> Dear R Group
> Can any body point me to a link from where I can get zip archive of the
> package H
Dear R Group
Can any body point me to a link from where I can get zip archive of the
package HH for R 2.12.0?
Thanks &
Regards
Vijayan Padmanabhan
"What is expressed without proof can be denied without proof" - Euclide.
Please visit us at www.itcportal.com
***
Dear RGroup
I have a data of the type shown below:
I am trying to use lme function followed by post hoc test as given in the
code below.
Am I right in my model definition, given the problem data structure.
in the example, i have used column names of my data frame so that it is
self explanatory.
On Feb 26, 2012, at 10:31 PM, Edgar Alminar wrote:
Hello All,
I have this dataset:
RID VISCODE SCRNO RECNO AEWHEN AEONDATE AEONTIME
INFPOINT.x INFDATE.x INFTIME.x INFPOINT.y INFDATE.y INFTIME.y
1 100 w00 IGI1480069 4 2 09/15/2009 1118
1 09/15/2009
Hello All,
I have this dataset:
RID VISCODE SCRNO RECNO AEWHEN AEONDATE AEONTIME INFPOINT.x
INFDATE.x INFTIME.x INFPOINT.y INFDATE.y INFTIME.y
1 100 w00 IGI1480069 4 2 09/15/2009 1118 1
09/15/2009 947 14 -4 1117
2 100 w00
Hello, again.
> Did anyone ever mention the 'countLines' function in R.utils.
No, I didn't know about it.
Thanks.
Rui Barradas
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Dear R-Users,
A new book "Guidebook to R Graphics Using Microsoft Windows (Wiley)" is
out.
http://as.wiley.com/WileyCDA/WileyTitle/productCd-111802639X.html
http://www.amazon.com/Guidebook-Graphics-Using-Microsoft-Windows/dp/111802639X/ref=sr_1_1?ie=UTF8&qid=1330301212&sr=8-1
E-
Dear List,
I have been trying to extract associations from a matrix whereby individual
locations are within a certain distance threshold from one another.
I have been able to extract those individuals where there is 'no interaction'
(i.e. where these individuals are not within a specified dista
Did anyone ever mention the 'countLines' function in R.utils.
On Sun, Feb 26, 2012 at 5:55 PM, Hans Ekbrand wrote:
>
> On Sun, Feb 26, 2012 at 09:39:46AM -0800, Rui Barradas wrote:
> > Hello,
> >
> > > The first step before to create a loop row-by-row is to know
> > > how many rows there are in t
Hi all,
I am trying to do some text mining with twitter and I am getting the error:
Error in structure(names(sapply(possibleCompletions, "[", 1)), names = x) :
'names' attribute [1] must be the same length as the vector [0]
When I use tm_map. Has anyone had/seen this error before? The code I
Hello,
So I need some help. I have been trying to get biocondutor to work on
my computer that has Ubuntu 11.10 running on it and I found out that I
needed to install something called TkTable before I install R. So I
did that but now I have no idea how to properly uninstall/reinstall R,
and I canno
On Thu, Feb 23, 2012 at 11:39 AM, Matthew Keller wrote:
> Thank you all very much for your help (on both the r-help and the
> bioconductor listserves).
>
> Benilton - I couldn't get sqldf to install on the server I'm using
> (error is: Error : package 'gsubfn' does not have a name space). I
> thin
Hi,
You can set na.action=na.roughfix which fills NAs with the mean or
mode of the missing variable.
Other option is to impute missing values using rfImpute, then run
randomForest on the complete data set.
Weidong Gu
On Sat, Feb 25, 2012 at 6:24 PM, kevin123 wrote:
> I am using the package Ran
On Sun, Feb 26, 2012 at 2:58 PM, Ivette wrote:
> Hello,
>
> Lets suppose I have an Excel sheet with 9 columns of data. How to tell R to
> read for example column 1 and 7 of this sheet? I know only the usual code
> without specifying columns:
>
> library(gdata)
> a <- read.xls("file.xls", sheet=1)
On Sun, Feb 26, 2012 at 09:39:46AM -0800, Rui Barradas wrote:
> Hello,
>
> > The first step before to create a loop row-by-row is to know
> > how many rows there are in the txt file without load in R to save memory
> > problem.
> >
> > some people know the specific function?
> >
>
> I don't be
Hello,
Lets suppose I have an Excel sheet with 9 columns of data. How to tell R to
read for example column 1 and 7 of this sheet? I know only the usual code
without specifying columns:
library(gdata)
a <- read.xls("file.xls", sheet=1)# reads in the 1st sheet
Thank you.
--
View t
Hello,
I'm searching for a function that creates the nearest positive semidefinite
correlation matrix.
Up to now I was only able to find the function nearcor().
Due to the fact, that a correlation matrix is only forced to be positive
semidefinite,
I prefer to find the nearest
Thank you!!
MyTable has 21 millions rows and 15 columns, and the data is "character",
they are words.
When I tried the loop my computer crashed in the meaning that it freezed
(froze?) and didn't allow me to do anything. The morning after I forced it
off and rebooted.
:-)
Thank you so much, I'll t
SORRY!
The data in MyTable are tagsets of photos, like this:
V1 V2 V3 V4 V5 V6V7 V8
230green nailpolish barrym 0 00 00
231 ny green brooklyn cleanup clean gowanus volunteer gcc
232green s
try setwd(choose.dir())
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x=your pseudo-observations in the interval [0,1]
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Sent from the R help mailing list archive at Nabble.com.
__
R-help@r-project.org mailing
Is there a way to normalize each layer of a RasterStack between 0 and 1
based on the minimum and maximum of each layer?
Thanks!
Cornelius
--
__
Cornelius Senf, Bsc.
Humboldt-University of Berlin
Geography Department
Geomatics Lab
www.hu-geomatics.de
__
Hello,
> The first step before to create a loop row-by-row is to know
> how many rows there are in the txt file without load in R to save memory
> problem.
>
> some people know the specific function?
>
I don't believe there's a specific function.
If you want to know how many rows are there in
I usually use a rasterLayer object (from raster package) instead of a
SpatialGridDataFrame, but you probably just have to bind it to your data :
TL_training_2006_id.raw@data$prediction <- pred
This will create a band in which you have your predictions. raster package
doesn't handle the factors, so
Untested die to no data, but this should work with a loop
out=vector("list", length= length(MyVector))
for(i in 1 : length (MyVector))
{
x <- data.frame (sum (MyTable ==MyVector[i]))
out[[i]] <- x
}
sum(do.call(rbind, out))
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View this message in context:
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Thanks for your replay!!! Problem solved!!
Best
Riccardo
2012/2/26 Yihui Xie
> print(xtable(...), ..., table.placement = '')
>
> this is an xtable problem; see ?print.xtable
>
> Regards,
> Yihui
> --
> Yihui Xie
> Phone: 515-294-2465 Web: http://yihui.name
> Department of Statistics, Iowa Stat
print(xtable(...), ..., table.placement = '')
this is an xtable problem; see ?print.xtable
Regards,
Yihui
--
Yihui Xie
Phone: 515-294-2465 Web: http://yihui.name
Department of Statistics, Iowa State University
2215 Snedecor Hall, Ames, IA
On Sun, Feb 26, 2012 at 3:30 PM, Riccardo Romoli wrot
suppressWarnings() will get rid of them for you.
Note that in R a factor cannot have duplicate levels. Compare the results with
use.value.labels turned on or off, to see which you prefer.
I also get the "unknown type" warnings, but I ignore them as my data seems to
arrive into R intact.
Hope
On Sun, Feb 26, 2012 at 04:12:03PM -0500, ying chen wrote:
>
> Hi,
>
> I am sorry about the format it showed up. I do not know what happened as now
> it looks worse even on my own machine. I do not know what to do, I just add
> "\n" to the end of each line and hope it will come out OK this ti
At this point you need to learn how to do some basic debugging of your
script. Open a GUI window that you can copy/paste parts of your script and
execute it piece-meal. Get to the point where you want to change your
working directory and do a 'getwd()' to see where you are. It is obvious
from yo
Hi, I'm working with Sweave and I have some trouble generating table. The R
code is:
print(xtable(myTable, caption ="", label="tab:myTab",
digits=3), tabular.environment='tabular', floating=TRUE,
caption.placement="top",size="\\scriptsize")
and the resulting LaTeX table is:
\begin{table
Stop it with the "fake" code if you want help. In keeping with the posting
guide, make one reproducible example that exhibits a real problem. For what it
is worth, I don't have difficulty with setwd().
---
Jeff Newmiller
Hi,
I am sorry about the format it showed up. I do not know what happened as now it
looks worse even on my own machine. I do not know what to do, I just add "\n"
to the end of each line and hope it will come out OK this time. The packages A,
B, C are not the real package names. Basically I
On Sun, Feb 26, 2012 at 05:06:42PM +0100, gianni lavaredo wrote:
> thanks Hans.
>
> It's true your idea improve the speed in the analysis respect a row-by-row
> loop.
>
> Sorry if I ask these questions to better understand and better performening
> my code:
>
> 1) split command in GNU coreutils,
Hi,
I am sorry about the format it showed up. I do not know what happened as it
looks fine when I read it using chrome on ubuntu 11.10 64bit. The packages A,
B, C are not the real package names. Basically I have scriptA.R that works
from inside a directory with my data (/home/sean/Rtest/D
On Sun, Feb 26, 2012 at 04:13:49AM -0800, mari681 wrote:
> Yes, I am a newbie.
>
> I have a data.frame (MyTable) of 1445846 rows and 15 columns with
> character data.
> And a character vector (MyVector) of 473491 elements.
>
> I want simply to get a data.frame with the count of how many times
On Sun, Feb 26, 2012 at 04:13:49AM -0800, mari681 wrote:
> Yes, I am a newbie.
>
> I have a data.frame (MyTable) of 1445846 rows and 15 columns with
> character data.
> And a character vector (MyVector) of 473491 elements.
>
> I want simply to get a data.frame with the count of how many times
This is a mess -- please resend in plain text.
Also, there are not, to my knowledge, packages (not libraries) called
"A", "B", or "C" so your script doesn't even begin to look
reproducible were it legible.
Do you have read/write access to the directories in question?
Michael
On Sat, Feb 25, 201
Thanks Uwe.
I definitely want to replace the NaN, unless someone has a better idea.
I have a couple of lists of label-value pairs that come from a randomForest
object.
I plot a series of precision- recall curves (not really curves but
zig-zags) from x and y lists that came from multiple randomFore
On Feb 26, 2012, at 7:13 AM, mari681 wrote:
Yes, I am a newbie.
I have a data.frame (MyTable) of 1445846 rows and 15 columns with
character data.
And a character vector (MyVector) of 473491 elements.
I want simply to get a data.frame with the count of how many times
each
element of MyV
apply(( DataForFrequency > threshold), 1, sum)),
FrequencyBins=ncol(DataForFrequency))
num [1:292256, 1:403] -106 -108 -110 -110 -112 ...
[[alternative HTML version deleted]]
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https://stat.ethz.ch/mailman
Hi,
I was wondering if there is a function or package for R that can be used
for "line-by-line" profiling, and yields an output similar to Matlab's
profiler?
For those of you that are not familiar with the Matlab profiler, it shows
you how much time each line in the code took to run. Moreover, if
On Sun, 26 Feb 2012, buehlerman wrote:
If I try the breakpoints() function (strucchange package) with a minimum
segment size = the number of regressors, there appears the following error
message:
"minimum segment size must be greater than the number of regressors"
According to the documentatio
On Sun, Feb 26, 2012 at 9:06 AM, knavero wrote:
> Quick newb question about R relating to the line of code below:
>
> rawCool = read.zoo("cooling.txt", FUN = as.chron, format = "%m/%d/%Y %H:%M",
> sep = "\t", aggregate = function(x) tail(x, 1))
>
> I'm wondering what the specifics are for the argu
If I try the breakpoints() function (strucchange package) with a minimum
segment size = the number of regressors, there appears the following error
message:
"minimum segment size must be greater than the number of regressors"
According to the documentation:
"breakpoints implements the algorithm de
On Sun, Feb 26, 2012 at 03:03:58PM +0100, gianni lavaredo wrote:
> Dear Researchers,
>
> I have a large TXT (X,Y,MyValue) file in a directory and I wish to import
> row by row the txt in a loop to save only the data they are inside a buffer
> (using inside.owin of spatstat) and delete the rest. Th
Short answer to a very good question: one has to use "function(x)
tail(x, 1)" syntax to avoid using the default tail(x, 6). There are
some other ways to achieve the same thing, but I think this syntax is
generally preferred for its clarity.
Other question: yes I believe so.
Michael
On Sun, Feb
Dear Ethienne, thanks a lot for your help.
We finally manage to perform the svm classification in this way:
library(spgrass6) ; G <- gmeta6()
TL_training_2006_id.raw<-readRAST6("TL_training_2006_id") # classes
training area
B1_B2_B3_train.raw<-readRAST6(c("AST_L1B_2008_05_2009_area_giusta_1_t
Quick newb question about R relating to the line of code below:
rawCool = read.zoo("cooling.txt", FUN = as.chron, format = "%m/%d/%Y %H:%M",
sep = "\t", aggregate = function(x) tail(x, 1))
I'm wondering what the specifics are for the argument where it has
"aggregate = function(x) tail(x, 1)". I u
Yes, I am a newbie.
I have a data.frame (MyTable) of 1445846 rows and 15 columns with
character data.
And a character vector (MyVector) of 473491 elements.
I want simply to get a data.frame with the count of how many times each
element of MyVector appears in MyTable.
I've tried a loop with :
Dear Researchers,
I have a large TXT (X,Y,MyValue) file in a directory and I wish to import
row by row the txt in a loop to save only the data they are inside a buffer
(using inside.owin of spatstat) and delete the rest. The first step before
to create a loop row-by-row is to know how many rows th
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