[Rd] Problem with types on 64-bit

2007-02-22 Thread tom
erting using AS_CHARACTER but that just brings up the same messages. I have also seen S4 and PROMSXP types come up in these error messages. What I don't understand is why this happens - any ideas? If I can supply any more info let me know, below is the CPU information for the 64

Re: [Rd] Cross-compilation

2006-10-26 Thread tom
at the g++ version of mingW32 may be the problem. Any suggestions, Tom "Tom McCallum" <[EMAIL PROTECTED]> wrote: > Thanks for your reply, as an example it appears to have difficulty linking > to even ostream library of the standard C++, as shown below: > > /home

Re: [Rd] Cross-compilation

2006-10-26 Thread tom
False alarm, those errors were due to the old iostream R.h ordering required - so not a lead after all. Tom [EMAIL PROTECTED] wrote: > More information for you. > > In order to test some ideas I had I first attempted to compile the gafit > package which is just a single file - t

[Rd] Windows 2000 crash while using rbind (PR#8225)

2005-10-19 Thread Tom . Mulholland
"Armadale (C)",..: 1 2 3 4 5 = 6 7 8 9 10 ... $ count: num 1107 2163 532 294 479 ... $ year : Factor w/ 5 levels "1991","1996",..: 1 1 1 1 1 1 1 1 1 1 ... > gc() used (Mb) gc trigger (Mb) max used (Mb) Ncells 3255820 87.06193578 165.4

Re: [Rd] javascript device for R

2006-02-05 Thread Tom Short
option is to use the canvas tag available in Firefox and Safari. You can use this to emulate the canvas tag in IE: http://me.eae.net/archive/2005/12/29/canvas-in-ie/ - Tom __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] Build failure on powerpc64

2019-12-12 Thread Tom Callaway
+#if HAVE_LONG_DOUBLE && (SIZEOF_LONG_DOUBLE > SIZEOF_DOUBLE) && !__PPC64__ static LDOUBLE q_1_eps = 1 / LDBL_EPSILON; #else static double q_1_eps = 1 / DBL_EPSILON; Hope that helps someone else. Tom [[alternative HTML version deleted]]

Re: [Rd] Build failure on powerpc64

2019-12-13 Thread Tom Callaway
tch and all of the tests pass on ppc64. Tom On Fri, Dec 13, 2019 at 5:44 AM Martin Maechler wrote: > >>>>> Tom Callaway > >>>>> on Thu, 12 Dec 2019 14:21:10 -0500 writes: > > > Hi R folks, > > > Went to build R 3.6.2 for Fedora/EPEL

Re: [Rd] Build failure on powerpc64

2019-12-13 Thread Tom Callaway
No, that does not change the issue: arithmetic.c:180:26: error: initializer element is not constant 180 | static LDOUBLE q_1_eps = 1.L / LDBL_EPSILON; Tom On Fri, Dec 13, 2019 at 11:56 AM Serguei Sokol wrote: > Le 13/12/2019 à 17:06, Tom Callaway a écrit : > > arithmetic.c: >

[Rd] Providing R binaries compiled against a multithreaded BLAS like Intel MKL by default?

2020-01-06 Thread Tom Wenseleers
s installed, or RcppArmadillo, which uses whatever BLAS one has compiled R against, but which is only a good option then if R versions with multithreaded BLAS are readily available on all systems). Or even, if it could be made possible to switch the type of BLAS used also on Windows, as is possibl

Re: [Rd] Build failure on powerpc64

2020-03-25 Thread Tom Callaway
This change seems correct, but as we don't have any non-PPC64 systems or build targets in the Fedora buildsystem, it won't affect Fedora if it doesn't make it. Tom On Wed, Mar 25, 2020, 6:16 AM peter dalgaard wrote: > Do note that 3.6-patched will only be live for a day o

[Rd] License for Rembedded.h

2010-08-03 Thread Tom Quarendon
Possibly more of a legal question than a technical development question, but here goes. In the doc\COPYRIGHTS file it is made clear that the intention is that you can write R packages and distribute them under licenses not compatible with GPL, by making the relevant header files available und

Re: [Rd] License for Rembedded.h

2010-08-04 Thread Tom Quarendon
nterface and wanting to link to that interface and whether the intention or the actuality of the license allow that. Thanks! -Original Message- From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-project.org] On Behalf Of Tom Quarendon Sent: 03 August 2010 13:23 To: r-devel@r

[Rd] Support for transparency in metafile export & support for export to Powerpoint

2015-06-29 Thread Tom Wenseleers
are now pretty much tied to using bitmap-based PNG, thereby limiting the ease with which the final layout of R graphs can be edited ! best regards, Tom Wenseleers Prof Tom Wenseleers University of Leuven Naamsestraat 59 3000 Leuven, Belgium https://bio.kuleuven.be/ento/wenseleers/twenseleers.htm

Re: [Rd] Support for transparency in metafile export & support for export to Powerpoint

2015-07-04 Thread Tom Wenseleers
od idea to incorporate this function in grDevices or something, please do! (would be handy e.g. if powerpoint export also showed in the File...Save as... interactive graphics devices, like windows() ) Otherwise I'll be in touch with the ReporteRs author to try to convince him to add it there. cheers, Tom [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] Support for high DPI 4K screens

2015-09-05 Thread Tom Wenseleers
://stackoverflow.com/questions/31381066/r-function-to-make-plot-symbols-line-widths-and-text-in-ggplot2-lattice-and-b/32412384#32412384 but nobody seemed to be able to come up with a good answer/solution. This made me wonder if there could perhaps be some low-level solution to this? best regards, Tom

[Rd] Default location where packages are stored under Windows

2015-09-05 Thread Tom Wenseleers
With a default installation of R on Windows platforms, packages are stored under Program Files/R/R-3.X.X/library. This often causes permission problems, as this directory is always read only by default, requiring the user to either change permissions for that directory or to change the directory

Re: [Rd] Default location where packages are stored under Windows

2015-09-05 Thread Tom Wenseleers
that the default directory is not writable... cheers, Tom From: Jeroen Ooms [jeroeno...@gmail.com] Sent: 05 September 2015 14:45 To: Tom Wenseleers Cc: r-devel@r-project.org Subject: Re: [Rd] Default location where packages are stored under Windows On Sat

Re: [Rd] Support for high DPI 4K screens

2015-09-05 Thread Tom Wenseleers
uld probably be most conveniently addressed somewhere at a low level in grDevices or grid... best regards, Tom From: R-devel [r-devel-boun...@r-project.org] on behalf of Brian G. Peterson [br...@braverock.com] Sent: 05 September 2015 15:56 To: r-devel@r-pro

[Rd] Return options used to configure R

2016-01-22 Thread Tom Quarendon
Is there any way to print out the options that where passed to configure when R was built? I want to build a later version to the one I have on my machine, and I want to build it in the same way, with the same configure options. Thanks. __ R-devel@r-p

Re: [Rd] Return options used to configure R

2016-01-22 Thread Tom Quarendon
2016 11:37 To: Tom Quarendon Cc: r-devel@r-project.org Subject: Re: [Rd] Return options used to configure R A one liner that should work on most systems: grep("configure", readLines(file.path(R.home(), "etc", "Makeconf")), value=TRUE) Gabor On Thu, Jan 21, 2016 at 5

Re: [Rd] Return options used to configure R

2016-01-22 Thread Tom Quarendon
nstalled that from a pre-built package. Ditto Windows. -Original Message- From: Dirk Eddelbuettel [mailto:e...@debian.org] Sent: 22 January 2016 12:07 To: Tom Quarendon Cc: Gábor Csárdi ; r-devel@r-project.org Subject: Re: [Rd] Return options used to configure R On 22 January 2016 at 11:40

Re: [Rd] [RFC] A case for freezing CRAN

2014-03-21 Thread Tom Short
For me, the most important aspect is being able to reproduce my own work. Some other tools offer interesting approaches to managing packages: * NPM -- The Node Package Manager for Node.js loads a local copy of all packages and dependencies. This helps ensure reproducibility and avoids dependency i

[Rd] Please make Pre-3.1 read.csv (type.convert) behavior available

2014-04-26 Thread Tom Kraljevic
Hi, We at 0xdata use Java and R together, and the new behavior for read.csv has made R unable to read the output of Java’s Double.toString(). This, needless to say, is disruptive for us. (Actually, it was downright shocking.) +1 for restoring old behavior. Thanks, Tom

Re: [Rd] Please make Pre-3.1 read.csv (type.convert) behavior available

2014-04-26 Thread Tom Kraljevic
ata easily (even just snippets) between tools is very valuable. Thanks, Tom Below is an example of how you can create a million row dataset which works fine (parses as a numeric), but then adding just one bad row (which still *looks* numeric!) flips the entire column to a factor. Finding that one

Re: [Rd] Please make Pre-3.1 read.csv (type.convert) behavior available

2014-04-26 Thread Tom Kraljevic
. Thanks, Tom On Apr 26, 2014, at 5:26 AM, Dirk Eddelbuettel wrote: > > On 26 April 2014 at 07:28, Duncan Murdoch wrote: > | On 26/04/2014, 12:23 AM, Tom Kraljevic wrote: > | > > | > Hi, > | > > | > We at 0xdata use Java and R together, and the new behavior for read.

Re: [Rd] Please make Pre-3.1 read.csv (type.convert) behavior available

2014-04-26 Thread Tom Kraljevic
.csv”. The last attempt results in a factor rather than a numeric column. What’s really odd about it is that the .a through .e case work fine but the .f case doesn’t. Thanks, Tom > bad.df = read.csv(file="/Users/tomk/bad.csv", header=F) > str(bad.df) 'data.frame':

Re: [Rd] Please make Pre-3.1 read.csv (type.convert) behavior available

2014-04-26 Thread Tom Kraljevic
happy to put all this into an R bug report if that is convenient for you. Thanks, Tom $ cat example.java class example { public static void main(String[] args) { String value_as_string = "-0x1.fff831c7dp-1"; double value = Double.parseDouble(value

Re: [Rd] Interface between R and a Open Load Flow tool (Gridlabd or OpenDSS)

2014-07-31 Thread Tom Short
It's certainly possible. The best approach depends mainly on how tightly you need to bind to input and output data and how much of the internals you need to access. Here are a couple of approaches that I've used with OpenDSS: * Batch mode -- Generate inputs, run OpenDSS (or Gridlab-D), then read t

[Rd] R process (and forked children via system2) are limited to 1 core?

2014-08-06 Thread Tom Kraljevic
1 Cpus_allowed_list: 0 See that the Cpus_allowed bitmask is a single core. Normally it's fff...f. I want my child process (java in this case) not to share this limitation. What is the recommended way of doing this from R? Any ideas or suggestions appreciated! T

Re: [Rd] R process (and forked children via system2) are limited to 1 core?

2014-08-06 Thread Tom Kraljevic
2960 27363 0 14:27 pts/300:00:00 grep --color=auto R tomk@mr-0xb4:~$ grep Cpus /proc/8366/status Cpus_allowed: 0001 Cpus_allowed_list: 0 As you can see, my R is super vanilla. I haven’t configured hardly anything. I’m just loading a few plain packages. Thanks, Tom On Aug 6,

[Rd] R process (and forked children via system2) are limited to 1 core?

2014-08-06 Thread Tom Kraljevic
Cpus_allowed_list: 0 See that the Cpus_allowed bitmask is a single core. Normally it’s fff…f. I want my child process (java in this case) not to share this limitation. What is the recommended way of doing this from R? Any ideas or suggestions appreciated! Thanks, Tom

Re: [Rd] R process (and forked children via system2) are limited to 1 core?

2014-08-06 Thread Tom Kraljevic
Nathaniel, that did the trick. Thanks so much for your help. Tom $ export OPENBLAS_MAIN_FREE=1 $ R $ cat /proc/1538/status | grep Cpus_allowed Cpus_allowed: Cpus_allowed_list: 0-31 On Aug 6, 2014, at 2:41 PM, Nathaniel Smith wrote: > On Wed, Aug 6, 2014 at 10:31 PM,

[Rd] R Segfault reported in Fedora 17

2012-09-17 Thread Tom Callaway
Full details, including all sorts of logs here: https://bugzilla.redhat.com/show_bug.cgi?id=857655 A very quick look doesn't show anything obvious, in fact, it might be a readline bug, but readline is remarkably stable and boring these days. ~tom == Fedora Pr

Re: [Rd] R Segfault reported in Fedora 17

2012-09-17 Thread Tom Callaway
#x27;t it? Yep. It sure is. Just wanted to put in on your radar in case it ends up being helpful. I don't have any real plans to try to dig deeper into it, since this is the first such report (and Fedora has automated mechanisms for reporting crashed apps).

Re: [Rd] Inaccurate complex arithmetic of R (Matlab is accurate)

2009-08-04 Thread Tom Short
ow.cc http://yorick.sourcearchive.com/documentation/2.1.01cvs20060706/ops2_8c-source.html - Tom __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] Grid Graphics Documentation: color specification with gpar() (PR#14013)

2009-10-18 Thread tom . gottfried
Full_Name: Tom Gottfried Version: 2.9.2 OS: Mac OS X 10.4.11 Submission from: (NULL) (93.104.160.207) Dear R-Developers, on the help page for gpar() is the following paragraph: "Specifying the value NULL for a parameter is the same as not specifying any value for that parameter, except fo

[Rd] Bug reporting system inquiry plus a bug report related to sort

2010-03-04 Thread Tom Short
> sort.list(x, na.last = NA, method = "radix") # good [1] 1 4 2 > sort.list(x, na.last = NA, method = "shell") # good [1] 1 4 2 > sort.list(x, na.last = NA, method = "quick") # still bad [1] 1 3 2 By the way, having the radix sort is great. It's really f

[Rd] Speed of for loops

2007-01-30 Thread Tom McCallum
. Also I have seen 'rle' which I think may help me but am not sure as I have only just come across it, any ideas? Many thanks Tom -- Dr. Thomas McCallum Systems Architect, Level E Limited ETTC, The King's Buildings Mayfield Road, Edinburgh EH9 3JL, UK Work +44 (0) 131

Re: [Rd] Speed of for loops

2007-01-31 Thread Tom McCallum
Thank you all for your advice and tips. In the end, I think the for loop is the easiest way forward due to other requirements but its good to know that I haven't missed anything too obvious. Tom On Tue, 30 Jan 2007 23:42:27 -, Oleg Sklyar <[EMAIL PROTECTED]> wrote: > I

[Rd] Best Practise

2007-05-14 Thread Tom McCallum
assToR is garbage collected then oldCArray will cause a SEGFAULT when it is accessed afterwards, won't it? Many thanks Tom -- PS Note this is the new email address - delete [EMAIL PROTECTED] as it won't work soon! __ R-devel@r-project.

Re: [Rd] Sweave/ESS-like tools for HTML

2007-10-16 Thread Tom Short
See this link for more on creating/converting to HTML: http://biostat.mc.vanderbilt.edu/twiki/bin/view/Main/SweaveConvert For using ESS with mixed HTML/R files, see this: https://stat.ethz.ch/pipermail/ess-help/2006-December/003826.html - Tom Tom Short Electric Power Research Institute

[Rd] DataTime field when converting between database formats

2008-03-03 Thread Tom McCallum
oming data, but thought I would register this behaviour in case anyone else came across it. Best, Tom __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] Constructing logical expressions dynamically

2008-07-02 Thread Tom Murray
Hello, I am trying to construct a logical expression dynamically, for use in the subset() function. I am puzzled by problems with the code that follows below. Probably there's an easier way to select rows of a data frame according to some dynamic criteria--and I'd love to hear about it--but I'd a

[Rd] RODBC Close Memory Leak Question

2008-07-10 Thread Tom McCallum
s is a new bug I will add it the bug tracker but I wanted to make sure I was not missing anything blindingly obvious to someone in the know. Thanks for your help, Tom version _ platform i686-pc-linux-gnu arch i686 os linux-gnu system

[Rd] RODBC Seg Fault

2008-07-14 Thread Tom McCallum
pointer. Any advice on how to fix this? Thanks for your help, Tom ##--- platform i686-pc-linux-gnu arch i686 os linux-gnu system i686, linux-gnu status major 2 minor 7.1 year

[Rd] Simple class with an automatic printing issue

2009-04-12 Thread Tom Short
I don't understand the following behavior for a simple S3 class. The auto-printing at the command line doesn't behave as I expect. I'm probably missing something, but it might be a bug. > print.testClass <- function(x, ...) cat("Class:", class(x), ":", x, "\n") > structure(1, class = "testClass")

Re: [Rd] Simple class with an automatic printing issue

2009-04-13 Thread Tom Short
Thanks, Bill. Searching R-devel based on your input shows that this is a known issue as pointed out by Martin Maechler: https://stat.ethz.ch/pipermail/r-devel/2008-October/051109.html - Tom On Sun, Apr 12, 2009 at 11:34 PM, William Dunlap wrote: > > It may have to do with the resu

[Rd] Memory problems with a custom R package

2006-09-12 Thread Tom McCallum
namespaces file (NAMESPACE) is as follows: useDynLib(MyPackage) export(hello) I have compared mine against other package sources available that do the same thing and cannot find the key difference. Thank you for your help in advance, Tom __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] time_t handling in R

2006-09-27 Thread Tom McCallum
versa )? Many thanks Tom -- Thomas McCallum Systems Architect LevelE Limited Phone: 0131 - 4724813 __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] Cross-compilation

2006-10-25 Thread Tom McCallum
machine, having completed all the previous sections of the tutorial for building a cross-platform version of R. Many thanks Tom -- --- Tom McCallum WWW: http://www.tom-mccallum.com Tel: 0131-4783393 Mobile: 07866-470257 __ R-devel@r-project.org mai

Re: [Rd] Cross-compilation

2006-10-25 Thread Tom McCallum
king R-2.4.0 as downloaded today. I know the g++ has gone through some alterations and wondered if you knew the version of g++ you cross-compiled your package with for comparison - mine is g++ (GCC) 4.0.2 20051125 (Red Hat 4.0.2-8). Many thanks Tom On Wed, 25 Oct 2006 18:10:40 +0100,

[Rd] Overloading functions

2006-10-27 Thread Tom McCallum
and call f( newGsource="newg.R" ) but I still get "Original function g". Any suggestions? Tom -- --- Tom McCallum WWW: http://www.tom-mccallum.com Tel: 0131-4783393 Mobile: 07866-470257 __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Overloading functions

2006-10-27 Thread Tom McCallum
On Fri, 27 Oct 2006 14:49:15 +0100, Paul Roebuck <[EMAIL PROTECTED]> wrote: > On Fri, 27 Oct 2006, Tom McCallum wrote: > >> I have a function f which does something using a function g. Function f >> is in a library and g has a default stub in the library but will be

Re: [Rd] Overloading functions

2006-10-27 Thread Tom McCallum
On Fri, 27 Oct 2006 15:54:40 +0100, Tom McCallum <[EMAIL PROTECTED]> wrote: > On Fri, 27 Oct 2006 14:49:15 +0100, Paul Roebuck <[EMAIL PROTECTED]> > wrote: > >> On Fri, 27 Oct 2006, Tom McCallum wrote: >> >>> I have a function f which does something us

[Rd] variable problem

2006-11-07 Thread Tom McCallum
to_act_as_argument(myvar) = mylist[[ myvar ]] ); } I hope I have explained myself clearly enough, if not please say so and I will try and give a better example. Many thanks for your help Tom -- Dr. Thomas McCallum Systems Architect, Level E Limited ETTC, The King's Buil

Re: [Rd] variable problem

2006-11-07 Thread Tom McCallum
Works like a charm - thank you very much. Tom On Tue, 07 Nov 2006 20:45:04 -, Vladimir Dergachev <[EMAIL PROTECTED]> wrote: > On Tuesday 07 November 2006 3:28 pm, Tom McCallum wrote: >> Hi everyone, > > Hi Tom, > > Would this snippet work: > > fo

[Rd] Retrieving function name

2006-11-09 Thread Tom McCallum
t would print "median" or f( my_function_name ) and it would print "m_function_name". So far all I can get is the function definition that myfunc points to. I thought the structure command might do it but this also just gives back the function definition and not the original nam

[Rd] String to list and visa versa

2006-11-14 Thread Tom McCallum
something like this or any tips for doing this that anyone can suggest? I basically don't care upon the string representation, only that I can manipulate the list as a string and then reparse it back to a valid list object. Many thanks for your help, Tom -- Dr. Thomas McCallum Sy

Re: [Rd] String to list and visa versa

2006-11-15 Thread Tom McCallum
for >> manipulation one would usually prefer a well-defined format. > > Thanks for the information, I think I am going to use the serialize/unserialize methods, which will mean I can't manipulate them outside R, but I can alter other parts of the project to accomodate th

[Rd] Manipulating R lists in C

2006-11-17 Thread Tom McCallum
of creating extra string objects etc are also helpful. Many thanks Tom ==EXTRACT= SEXP typeStr, volumeStr, priceStr, typeValStr; SEXP priceList; // create main list of vectors (unspecific items ) PROTECT( priceList = allocVector( VECSXP, 3 ) ); // for each it

Re: [Rd] Manipulating R lists in C

2006-11-17 Thread Tom McCallum
Thank you so much!! - that works now. Tom On Fri, 17 Nov 2006 14:40:38 -, Roger Bivand <[EMAIL PROTECTED]> wrote: > On Fri, 17 Nov 2006, Tom McCallum wrote: > >> Hi, >> >> I have been studying the R manual on lists but cannot seem to create a >> si

[Rd] Data table in C

2006-11-17 Thread Tom McCallum
here a better way of creating a 2 dimensional data frame with names columns? I could not find a "data.frame" object so I assume one has to use lists but I can't see how to get a 3 column list as the example below shows: a b d 1 1 4 7 2 2 5 8 3 3 6 9 Tom -- Dr. Thomas

Re: [Rd] dyn.load

2006-11-22 Thread Tom McCallum
To answer my own question - you can use DllMain with Rwin_fpset() to get around this error message. Am still struggling though as it crashes when it tries to call a function in the wrapped DLL - any ideas on how to debug this? Hope this is of help to some one Tom On Tue, 21 Nov 2006 17:30

[Rd] Ralloc clash

2006-11-22 Thread Tom McCallum
round this? Have checked the web and have not seen anyone else comment on this. Many thanks Tom -- Dr. Thomas McCallum Systems Architect, Level E Limited ETTC, The King's Buildings Mayfield Road, Edinburgh EH9 3JL, UK Work +44 (0) 131 472 4813 Fax: +44 (0) 131 472 4719

Re: [Rd] Ralloc clash

2006-11-23 Thread Tom McCallum
: c:/MinGW/bin/../lib/gcc/mingw32/3.4.5/../../../../include/objidl.h:532:45: macro "Realloc" requires 3 arguments, but only 2 given make: *** [callcdeclcall.d] Error 1 ==END ERROR MSG OUTPUT== Headers in CPP file are: #include #include #include #include #include T

Re: [Rd] Ralloc clash

2006-11-23 Thread Tom McCallum
e g++ when doing R CMD SHLIB - would putting it in one of the PKG_ environment variables work - if so which? Tom On Thu, 23 Nov 2006 11:13:44 -, Prof Brian Ripley <[EMAIL PROTECTED]> wrote: > Realloc is defined in R_ext/RS.h, and only if STRICT_R_HEADERS is not > defined.

Re: [Rd] Ralloc clash

2006-11-23 Thread Tom McCallum
Thank you that did the job. Tom On Thu, 23 Nov 2006 13:06:29 -, Prof Brian Ripley <[EMAIL PROTECTED]> wrote: > On Thu, 23 Nov 2006, Prof Brian Ripley wrote: > >> Realloc is defined in R_ext/RS.h, and only if STRICT_R_HEADERS is not >> defined. This *is*

[Rd] Floating point maths in R

2006-12-09 Thread Tom McCallum
s doesn't account for the 16th decimal place behaviour does it? If any one has a work around or reason why this should occur it would be useful to know. what I would like is to be able to do sums such as (2.3456 - 2 ) == 0.3456 and get a sensible answer - any suggestions? Currently th

Re: [Rd] Floating point maths in R

2006-12-09 Thread Tom McCallum
Many thanks for pointing that out. Tom On Sat, 09 Dec 2006 13:48:06 -, Peter Dalgaard <[EMAIL PROTECTED]> wrote: > Tom McCallum wrote: >> Hi, >> >> I am not sure if this is just me using R (R-2.3.1 and R-2.4.0) in the >> wrong way or if there is

Re: [Rd] looks in liblapack.a not liblapack.so

2005-09-28 Thread Tom 'spot' Callaway
discussion of lapack and its patching) Thanks, ~spot -- Tom "spot" Callaway: Red Hat Senior Sales Engineer || GPG ID: 93054260 Fedora Extras Steering Committee Member (RPM Standards and Practices) Aurora Linux Project Leader: http://auroralinux.org

Re: [Rd] make error for R 2.13.0 (and 2.12.0)

2010-11-02 Thread Tom "spot" Callaway
On 10/18/2010 03:03 AM, Peter Dalgaard wrote: > On 10/18/2010 02:39 AM, Radford Neal wrote: >> Regarding Tengfei Yin's post about an error trying to install >> "cluster" in 2.13.0, I have gotten an error with this package when >> trying to install the released version of 2.12.0. Here is the output

Re: [Rd] make error for R 2.13.0 (and 2.12.0)

2010-11-22 Thread Tom "spot" Callaway
On 11/05/2010 07:59 AM, Johann Hibschman wrote: > "Tom \"spot\" Callaway" writes: > >> Full build log is here: >> http://koji.fedoraproject.org/koji/getfile?taskID=2571563&name=build.log >> >> Default gcc in RHEL 4 is 3.4.6-10, which has g

[Rd] Stack smashing in RODBC

2010-01-25 Thread Tom "spot" Callaway
This is R 2.10.1, from Fedora 12 and RODBC 1.3-1 (although 1.3-0 has the same problem) on i686. Originally reported here: https://bugzilla.redhat.com/show_bug.cgi?id=557953 Reproducer and output below: [s...@f12.i386 src]$ R R version 2.10.1 (2009-12-14) Copyright (C) 2009 The R Foundation for

Re: [Rd] Stack smashing in RODBC

2010-01-25 Thread Tom "spot" Callaway
On 01/25/2010 09:14 PM, Dirk Eddelbuettel wrote: > I cannot replicate this on Debian. The error gets trapped just fine. This may > be particular to your builds or setup. I don;t see an R error (but of course > do not speak for R Core). Here is a short version, it is the same in normal > interactive

Re: [Rd] Stack smashing in RODBC

2010-01-26 Thread Tom "spot" Callaway
On 01/26/2010 06:17 AM, Dirk Eddelbuettel wrote: > > On 26 January 2010 at 01:23, "Tom \"spot\" Callaway" wrote: > | On 01/25/2010 09:14 PM, Dirk Eddelbuettel wrote: > | > I cannot replicate this on Debian. The error gets trapped just fine. This > may >

[Rd] Support for noarch packages in /usr/share/R/library

2007-03-13 Thread Tom 'spot' Callaway
As originally raised here: https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=231220 It has been proposed that R should support noarch packages in /usr/share/R/library in addition to architecture specific packages in /usr/lib/R/library or /usr/lib64/R/library. For example, the mAr addon doesn't

Re: [Rd] make check-all fails on F8

2007-11-09 Thread Tom "spot" Callaway
On Fri, 2007-11-09 at 11:41 -0600, Marc Schwartz wrote: > I have been looking ("tunnel vision") at this now for several hours > going back to last night, and am probably missing something basic here, > but is this the result of a change in the behavior of diff on F8, or is > something else going

Re: [Rd] Security issue with javareconf script (PR#12636)

2008-08-29 Thread Tom "spot" Callaway
On Fri, 2008-08-29 at 20:04 +0200, Peter Dalgaard wrote: > OK, committed. Not the easiest hole to exploit, I'd say (notice that > we > only compile something, not execute it). > > > . > > Oh, sh*! This is not portable! Needs code like INSTALL. Will refix. Sorry about that. I forgot that pe

[Rd] Configure error when compiling on "sh" architecture

2008-10-16 Thread Tom "spot" Callaway
hat.com/show_bug.cgi?id=456886 I've attached the same patch that is in 464055 to this email. Hopefully, at some point before the sun explodes, that fix will end up in autoconf, and upstreams will pick it up when they run the fixed autoconf on their tree. Thanks, ~tom --- R-2.7.2/configure.org

[Rd] HAVE_BZLIB_H not set

2008-10-26 Thread Tom "spot" Callaway
When building 2.8.0 this morning for Fedora, I noticed that it was building the included bzlib2 source and using it rather than the system bzip2 libraries and headers. I tracked down the reason to this section of configure: cat >>conftest.$ac_ext <<_ACEOF /* end confdefs.h. */ #ifdef HAVE_BZLIB_

Re: [Rd] eval(match.call()) (PR#9339)

2006-11-04 Thread Tom 'spot' Callaway
zed memory at the end of ".Primitive". > > > > (This is in a copy of R source from June 2006.) I was halfway to identifying this when Bill figured it out. :) New packages are built for FC-4, FC-5, FC-6, and devel which bring us up to the 11-03 patched level. Thanks for the