hadley wickham wrote:
> Patch attached.
>
> If this is acceptable, would someone please be able to check this in for
> me?
Probably you do not wanted to post this to R-edev (where the attachment
has been stripped off anyway)
Uwe Ligges
> Than
Uwe Ligges wrote:
> hadley wickham wrote:
>
>> Patch attached.
>>
>> If this is acceptable, would someone please be able to check this in
>> for me?
>
>
>
> Probably you do not wanted to post this to R-edev (where the attachment
> has been stripp
better using R-2.3.1 beta)? We have not had any other
report on such a behaviour so far.
Uwe Ligges
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Friedrich Leisch wrote:
>>On Wed, 31 May 2006 10:57:54 -0400,
>>Kuhn, Max (KM) wrote:
>
>
> > Hi,
> > I have a package that I'd like to submit to CRAN that does Sweave-like
> > processing on Open Document format files from Open Office.
>
> Sounds very interesting!
>
>
> > If I
Paul Gilbert wrote:
> I am getting several errors about Windows only packages when I use task
> views. Is this suppose to be a Windows-centric utility?
Paul,
not at all, but the 3 packages mentioned below only work under Windows,
because they depend on software such as DCOM, OpenBUGS and MIM,
Achim Zeileis wrote:
> Paul,
>
> ctv is a contributed package...
>
>
>>I am getting several errors about Windows only packages when I use
>>task views. Is this suppose to be a Windows-centric utility?
>
>
> No.
> I'll see whether there is an easy way to keep install.views() from
> installing
kage source, then reinstalling and reloading?
>
> Thanks,
> Sean
>
See ?assignInNamespace and ?fixInNamespace
During developing, I suggest to remove the NAMESPACE temporarily.
Uwe Ligges
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ip file was a hack in the first place, but is there
> any way to continue to make windows packages easily, or should I grit
> my teeth and install the cross compilation tool chain?
Either the latter or ask the Windows users to install the source package.
Uwe Ligges
> Thanks,
&g
this is what a user reported)
Oh well, certainly the user forgot to install the required tools as
mentioned in the "R Installation and Administration" manual.
Uwe Ligges
> Hadley
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p)
> useDynLib(ade4)
> importFrom("dist.dudi", "ade4")
Please do it the right way (package name first!):
importFrom("ade4", "dist.dudi")
Uwe Ligges
> importFrom("solve.QP", "quadprog")
> importFrom("mstree", "
If you want to use the CRAN package quadprog, you should import its
functionality, but do NOT load its dynamic library with useDynLib(),
this will be done by the namespace mechanismsm.
Why do you want to put its dll anywhere? Simply install the package
quadprog and use it in your namespa
rt to the package
maintainer.
Please do not send bug reports on contributed packages to R-bugs!
Uwe Ligges
> I've been running some normality tests using the nortest package. For
> some of my datasets the Cramer-von Mises normality test generates an
> extremely high probabilit
miguel manese wrote:
> Hello,
>
> Do we have like an official unit testing framework for packages? Like
> we do R CMD check, and say the scripts in /test are executed?
The scripts are executed with R CMD check. What else do you need?
Uwe Ligges
> Or do we roll out our own outs
, using the *.txt (or
> *.html) help files?
Well, the user has to ask
help(topic, chmhelp = FALSE)
in this case, or (s)he get the message:
No CHM help for 'foo' in package 'pkg' is available:
the CHM file for the pack
n already did!
From CHANGES:
"The installer can set defaults for MDI/SDI display, help style, and
default action on q(). Custom builds of R can change these defaults."
Uwe Ligges
> Thanks for considering this proposition.
> Best,
>
>
This is a minor documentation inconsistency:
While the R Installation and Administration manual speaks about the file
"R-x.y.z.tgz", this has to be replaced by "R-x.y.z.tar.gz" for x > 1.
Uwe Ligges
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ount
> for doing cross-compile's.
I cannot imagine: Why should one want to perform difficult cross
compiling if you have Windows available?
And why should I run R under wine? If I like Windows, I use Windows, if
I have like Linux, there is no reason to run R under wine.
Uwe Ligges
>
Duncan Murdoch wrote:
> I have just updated the MinGW tools to the latest versions. These don't
> include a patch that was intended to ensure NT 4 compatibility, but I
> don't know if the patch is still necessary.
>
> If anyone is still using NT4, could you please download R-patched, and
> s
do this on systems
> they don't have,
because "CRAN does check" is used in a wide sense and includes, among
others, also my *Windows* server in Dortmund that does the Windows checks.
(If you have some Windows license, a virtual machine can do the job.)
Uwe Ligges
.) should do it itself. There is an example on
the help page ?dev.copy. So: What is difficult here (it is hard for us
to anticipate what you are not understanding)? What about giving an
example of code that shows how you undertsood that page, so we can try
to correct.
Uwe Ligges
>
You might want to publish you package on some URL and perhaps someone
reading this list looks at it and is able to help, but without seeing
the details, it wil be hard and only guesswork.
Uwe Ligges
Selwyn-Lloyd McPherson wrote:
> If I do R CMD CHECK, R uses the makefile that came with
package is GPL, R is GPL, so this part should be fine.
>
>>> Or in general is there a better way than supplying the dll to use a
>>> third-party library (libxml2) in a package which should build on windows as
>>> well?
>> As I understand it, several
again under current R-devel
tomorrow. They won't appear on CRAN master before Wednesday. In the
meantime, the link to R-2.3.x packages will remain active and some
packages simply won't work.
Best,
Uwe Ligges
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l: No such file or directory. Stop.
> make: *** [pkg-log2html] Error 2
> *** Installation of log2html failed ***
> Removing 'D:/tmp/log2html.Rcheck/log2html'
>
> Can anybody provide me with hints how to solve this
> pro
Prof Brian Ripley wrote:
> At least some of this will go away if you use a current version of 2.4.0
> alpha rather than one that is a week old (as the posting guide does ask).
> We are now at r39258, and some of those binary packages were built against
> a substantially later version of 2.4.0
not use NAMESPACE.
>
> Is there a way to "export" a name so that the current package
> user can see it, but other packages cannot see it? My working
> assumption is that this is not possible, so I use a prefix like
> the package name to keep function names "local.&quo
from
>> each other.
>
> You can distinguish the tarballs according their version number and patch
> level (they are called "--.tar.gz"
>
>> Perhaps you can make this work for you by using a more meaningful
>> description than version number in your br
elp.
The entry points are no longer exported, you probably have to specify
the zlib header files (which reside in R/src/extra/zlib).
Uwe Ligges
> Some snippets from the build process:
>
> R-2.3.1
>
> making DLL ...
> gcc -Ic:/R-2.3.1/src/extra/zlib -DHAVE_ZLIB -Ic:/R-2.3.
Gabor Grothendieck wrote:
> This would seem to violate the user interface stereotype that
> command lines are case insensitive on Windows.
This is an improvement. R tries to be as unique as possible on all
platforms.
Uwe Ligges
> On 10/1/06, Duncan Murdoch <[EMAIL PROTECTED]>
to load default encoding
> In addition: Warning message:
> failed to load encoding file 'WinAnsi.enc'
Have you removed some files from your installation?
Uwe Ligges
>> postscript()
> Error in postscript() : failed to load encoding
> In addition: Wa
Gabor Grothendieck wrote:
> I can't seem to find any way to get from the main R page to
>
>http://cran.r-project.org/contrib/extra/
Everything in there is linked on CRAN -> Software - Other
Uwe Ligges
> via any series of links. Does such a path
, my try does
not transpose anything:
x <- 5:1
x
sort(x)
So, please
Uwe Ligges
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R-devel@r
Vista, it would be
nice to be able (i.e. knowing what to do) to apply relevant changes
before the next major release (R-2.5.0?).
Best,
Uwe
Charles Annis, P.E. wrote:
> Problem solved!
>
> Thanks to all and especially Clint Bowman and Uwe Ligges who pointed to the
> fly in the o
annot expect sort to do anything meaningful when applied to
matrices or arrays other than returning a sorted vector of the elements,
and that is what sort does nowadays.
Best,
Uwe Ligges
> Regards, Ulrike
>
> -- Original Message ---
> From: Uwe Ligges <[EMAIL PROTECTE
Deepayan Sarkar wrote:
> Announcement:
>
> (For those every-once-in-a-while occasions when you run R from a
> terminal instead of Emacs, and then wish something would happen when
> you hit TAB...)
>
> Last week, I started looking at the GNU Readline documentation to see
> if I could figure out
Dirk Eddelbuettel wrote:
> Running R CMD check on a local package, I get
>
> * checking Rd files ... OK
> * checking Rd cross-references ... WARNING
> Error in .find.package(package, lib.loc) :
> there is no package called 'boot'
Probably the boot installation in one of your libraries i
Please, how do you define a "blank" value?
The following works perfectly for me:
File looks like:
SpaceTabSpace
1Tab2
R> read.table(file, sep="\t")
V1 V2
1 NA NA
2 1 2
Uwe Ligges
[EMAIL PROTECTED] wrote:
> Full_Name: Miguel Andrade
> Version: 2.3.1
That it does not run does not mean there is a bug in R, so why do you
submit a bug report that must be handled manually by some R Core member?
Please tell us the error message, we cannot help you unless you provide
us with the relevant details.
Uwe Ligges
[EMAIL PROTECTED] wrote:
> Full_N
I just looked into the one for P4 and it does export zdrot_ and works
for me. Is your one from CRAN master?
Uwe Ligges
Daniel Nordlund wrote:
> I encountered the following problem in R-2.4.0 for Windows binary downloaded
> from CRAN (data from R-help post by Ethan Johnsons). I was also
Please read how to report bugs:
1. sqlSave is not part of R's base packages, hence please do not submit
a bug report here but ask the package maintainer of the corresponding
package.
2. You have tested with an outdated version of R (2.4.1 is recent).
Uwe Ligges
[EMAIL PROTECTED]
funding the machine,
electricity, space and bandwidth.
Best,
Uwe Ligges
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!
Particularly, SAGx is a Bioconductor package:
http://bioconductor.org/packages/1.9/bioc/html/SAGx.html
Hence please look at the BioC repository and ask on the corresponding
mailing list, in case there is really something wrong!
Uwe Ligges
[EMAIL PROTECTED] wrote:
> Full_Name: Alexandra R Mendes
(but on the mailing list
R-help rather than submitting a bug report!) if you still fail with the
attempts to install R.
Uwe Ligges
[EMAIL PROTECTED] wrote:
> Full_Name: Ricardo Aponte
> Version: R 2.4.0
> OS: Solaris 10
> Submission from: (NULL) (200.71.37.195)
>
>
> Hel
Ulrike,
It can happen that different types of simulations and programs can put
load on different regions of the CPU and comsume different amounts of
power or simply are causing different patterns in the power consumptions
Two things might cause the noise (at least, I have seen these things in
l to reuse repository data.
Many thanks for your consideration,
LluĂs
PD: From CRAN perspective CRAN_packages_db() function can be used to
get Additional_repositories, but this is limited to CRAN and won't
work for BiocViews on Bioconductor or for other arbitrary fields like
'&quo
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