[Rd] heatmap documentation typo

2011-06-30 Thread Jonathan Dushoff
Under Details, the documentation says "[if Rowv or Colv] is 'NULL', _no reordering_ will be done for the corresponding side." In fact, as explained elsewhere in the documentation, 'NA' is required, not 'NULL'. An anonymous expert suggested that I should attach an svn diff file to this report, so

[Rd] nlme: lme gives incorrect answers without warning with redundant data

2016-05-04 Thread Jonathan Dushoff
I think this issue will be of interest to the list. It seems like a problem with nlme, and I was drawn into it because of a collaborator who encountered this issue in a simple experiment and wound up questioning the mixed model approach to his question. The issue is that lme, when faced with certa