-redhat-linux
Thread model: posix
gcc version 3.4.4 20050721 (Red Hat 3.4.4-2)
Regards,
Jennifer
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x.c: 10317)
PGC/x86-64 Linux/x86-64 6.0-5: compilation completed with severe errors
make[3]: *** [regex.o] Error 2
make[3]: Leaving directory `/home/cuser/AMD_BENCH/R-2.1.1/src/main'
make[2]: *** [R] Error 2
Any help is greatly appreciated.
Thanks,
Jennifer
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quot;C" void exit (int);
| #endif
| /* end confdefs.h. */
| #include
configure:6002: result: /usr/pgi/linux86-64/6.0/bin/pgCC -E
configure:6026: /usr/pgi/linux86-64/6.0/bin/pgCC -E
-I/usr/pgi/linux86-64/6.0/include -I/usr/pgi/linux86-64/6.0/include/CC
conftest.cc
configure:6032: $? = 0
con
errors also happened in other packages, such as affy.
Since "/* */" comment style is acceptable by both PG Compiler and gcc,
it is probably worthwhile to use "/* */" consistently throughout R
packages.
Regards,
Jennifer
Prof Brian Ripley wrote:
> Let us be clear: so
on x86_64-unknown-linux-gnu
configure: WARNING: assuming C longs are 4 byte on x86_64-unknown-linux-gnu
configure: WARNING: you cannot build info or html versions of the R manuals
Am I defining a wrong host?
Thanks,
Jennifer
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st
info been cached somewhere in R?
Regards,
Jennifer
Peter Dalgaard wrote:
>Jennifer Lai <[EMAIL PROTECTED]> writes:
>
>
>
>>Hi,
>>I built R with Portland Group compiler, but I noticed one thing that
>>when I ran configure for the first time on AMD machine
Forgot to mention, here are #define long and int value in config.log
from second configure run (without --host argument)
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_LONG_DOUBLE 16
Regards,
Jennifer
Jennifer Lai wrote
error: cannot run C
compiled programs.
If you meant to cross compile, use `--host'.
Thank you for the help!
Sincerely,
Jennifer
Peter Dalgaard wrote:
>Jennifer Lai <[EMAIL PROTECTED]> writes:
>
>
>
>>I can't duplicate the error message. After running "configu
libso:/usr/local/lib64
Can anyone advise me on how to build R with ATLAS?
Thanks,
Jennifer
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l'
However, it failed to pick up double complex BLAS,
checking for sgemm_ in -lacml... yes
checking whether double complex BLAS can be used... no
Can anyone advise me on how to fix this problem?
Thank you in advance for your help!
Sincerely,
Jennifer
ompiler successfully.
Regards,
Jennifer
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Is there other thing I should look into in the config.log?
Your help is very much appreicated.
Thanks,
Jennifer
Prof Brian Ripley wrote:
>On Sat, 24 Sep 2005, Jennifer Lai wrote:
>
>
>
>>Hi,
>>How does complex.h used in R? Whether a compiler support complex.h
&
Hi,
Prof Brian Ripley wrote:
> On Mon, 26 Sep 2005, Jennifer Lai wrote:
>
>> Hi,
>> I checked config.log and BLAS_LIBS was not set. However, I have set
>> BLAS_LIBS='-L/usr/lib64 -lblas' in config.site file.
>> I can't figure out why BLAS_LIBS is not
memory (2
GB RAM) than 1.8 GHz (1 GB RAM). The only difference is that 1.8 GHz is
a dual-processor machine, and
2.2 GHz is a single processor machine. Could this be the reason?
Does anyone has insights on this?
Thanks,
Jennifer
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BLAS_LIBS='-L/usr/lib64 -lg2c -lblas' # for generic BLAS
library that comes with OS distribution.
Regards,
Jennifer
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r 2
Has anyone seen this error message before? Where can I find shared
library tools?
Thanks,
Jennifer
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Prof Brian Ripley wrote:
>On Thu, 13 Oct 2005, Jennifer Lai wrote:
>
>
>
>>Hi,
>> I"m a newbie on building R on Windows. I followed the instructions
>>cited here,
>>http://www.murdoch-sutherland.com/Rtools/ to build R-2.2.0.
>>Everything w
Prof Brian Ripley wrote:
> On Thu, 13 Oct 2005, Jennifer Lai wrote:
>
>> Prof Brian Ripley wrote:
>>
>>> On Thu, 13 Oct 2005, Jennifer Lai wrote:
>>>
>>>
>>>> Hi,
>>>> I"m a newbie on building R on Windows. I followe
ystem.time(for (i in 1:1)
+ nchar(op)
+ )[3]
[1] 0.66
Is there any faster way of getting the length of string in R?
Thank you in advance for your help!
Sincerely,
Jennifer
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Hi:
I have also just stumbled into this bug. Unfortunately, I can not
change the data my program receives from stdin. My code runs in a
larger system and stdin is sent to a Docker container running my R
code. The protocol is I read a line, readLines("stdin", n=1), do some
actions, send output on s
t; > > Sounds like you might want to be running a web service or
> > > something instead though.
> >
> > > Michael
> >
> > > On Tue, Jun 12, 2018 at 4:46 PM, Jennifer Lyon
> > > wrote:
> > >> Hi:
> > &
Michael:
I don't see any comments on Bug 17432 (
https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17432) later than June
1, 2018. Would you please supply a link pointing to the followup to this
discussion on bugzilla?
Thanks.
Jen.
> On Thu Sep 13 14:14:46 CEST 2018 Michael Lawrence wrote:
>
Hello,
I'm interested in moving text from and to the clipboard that cannot
necessarily be represented in the native encoding. So, really, this is
about Windows.
I can successfully read from the clipboard by specifying the format that
corresponds to unicode text.
>From R >=2.7.0, it seems you sho
Hello,
I'm interested in moving text from and to the clipboard that cannot
necessarily be represented in the native encoding. So, really, this is
about Windows.
I can successfully read from the clipboard by specifying the format that
corresponds to unicode text.
>From R >=2.7.0, it seems you sho
Hello,
I'm seeing a nuisance warning when I run `R CMD check --as-cran
whatever_x.y.z.tar.gz`.
I generally work with these options set:
options(
warnPartialMatchArgs = TRUE,
warnPartialMatchAttr = TRUE,
warnPartialMatchDollar = TRUE
)
And I see this:
* checking use of SHLIB_OPENMP_*FLAGS
Hi,
I am writing a test that consults the serialization version of an `.rds`
file.
An attractive way to get this is:
tools:::get_serialization_version() # reports just version
which calls
.Internal(serializeInfoFromConn() # reports much more
but neither is truly exported for public use.
Is t
I think it would be helpful if readBin checked that its endian argument is
a legal value.
Why? I was reviewing some of our code and noticed that the author had
readBin(..., endian="network") and never having heard of "network", I
looked at the man page for readBin, and it hadn't heard of "network"
s, unfortunately in their case the intention
> was to specify "little".
>
> Best
> Tomas
>
> On 11/18/19 11:22 PM, Jennifer Lyon wrote:
> > I think it would be helpful if readBin checked that its endian argument
> is
> > a legal value.
> >
> &
Hi:
The "Daily News about R-devel/NEWS" webpage at
http://developer.r-project.org/blosxom.cgi/R-devel/NEWS seems to not be
updating. As of today, the latest entry is Tue, 14 Apr 2020.
Thanks.
Jen
[[alternative HTML version deleted]]
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Thank you!
Jen
On Fri, May 15, 2020 at 9:02 AM Duncan Murdoch
wrote:
> On 15/05/2020 10:39 a.m., Jennifer Lyon wrote:
> > Hi:
> >
> > The "Daily News about R-devel/NEWS" webpage at
> > http://developer.r-project.org/blosxom.cgi/R-devel/NEWS seems to not be
On the documentation page for DateTimeClasses, in the Examples section,
there are the following two lines:
format(.leap.seconds) # the leap seconds in your time zone
print(.leap.seconds, tz = "PST8PDT") # and in Seattle's
The second line (using print) seems to ignore the tz argument, and
Hi:
I have a 2.1GB JSON file. Typically I use readLines() and
jsonlite:fromJSON() to extract data from a JSON file.
When I try and read in this file using readLines() R segfaults.
I believe the two salient issues with this file are
1). Its size
2). It is a single line (no line breaks)
I can rep
s s work-around I suggest readr::read_file.
>
> --Ista
>
>
> On Sep 2, 2017 2:58 PM, "Jennifer Lyon" wrote:
>
>> Hi:
>>
>> I have a 2.1GB JSON file. Typically I use readLines() and
>> jsonlite:fromJSON() to extract data from a JSON file.
>>
y any "solution" that tries to load the whole file into R first as a
string, will fail.
Thanks for suggesting a path forward for me!
Jen
On Sun, Sep 3, 2017 at 2:15 AM, Jeroen Ooms wrote:
> On Sat, Sep 2, 2017 at 8:58 PM, Jennifer Lyon
> wrote:
> > I have a 2.1GB JSON file. Typi
Hello,
I've noticed a specific type of pipe() usage that works in released R, but
not in r-devel.
In 4.3.2 on macOS, I can write to a connection returned by pipe(), i.e.
"hello, world" prints here:
> R.version.string
[1] "R version 4.3.2 (2023-10-31)"
> con <- pipe("cat")
> writeLines("hello, wo
I've now tested with:
> R.version.string
[1] "R Under development (unstable) (2024-02-16 r85931)"
and all of the previously mentioned examples now work as expected on macOS.
Thanks for the quick fix,
Jenny
On Thu, Feb 15, 2024 at 8:02 AM Tomas Kalibera
wrote:
>
> On
There is a small typo in the Source section of the help page
for log1p:
Source:
'log1p' and 'expm1' may be taken from the operating system, but if
not available there are based on the Fortran subroutine 'dlnrel'
there -> they
Jen
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform:
Prof Brian Ripley wrote:
>
>> As those of you who saw my post on R-help know, I've been trying to
>> build
>> R-patched on a dual Opteron box running Scyld Beowulf, using the PGI 6.1
>> compilers. The build went fine, but I couldn't get it to pass make
>
Jennifer Lai wrote:
> Prof Brian Ripley wrote:
>
>>
>>> As those of you who saw my post on R-help know, I've been trying to
>>> build
>>> R-patched on a dual Opteron box running Scyld Beowulf, using the PGI
>>> 6.1
>>> compi
Prof Brian Ripley wrote:
> On Tue, 6 Jun 2006, Jennifer Lai wrote:
>
>> Hi,
>>Has anyone had success in building R source with Visual Studio? I
>> followed the instructions in README.packages, but failed on the very
>> first step, where it's looking for R
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