Re: [Rd] Suggested Patch: Adding commas to list of packages after R CMD check

2018-10-02 Thread Martin Maechler
> Duncan Murdoch > on Tue, 18 Sep 2018 16:23:47 -0400 writes: > On 18/09/2018 2:16 PM, Marcel Ramos wrote: > > Dear R-devs, > > > > > > Scenario: > > > > When checking a package via `R CMD check package_tar.ball`, required / > > suggested packages may be missing. R subsequently re

Re: [Rd] Problem with parseData

2018-10-02 Thread Tomas Kalibera
The fix is now in R-devel, 75386. I have not ported to R-patched, because the fix breaks two packages which are working around this bug (and to my knowledge without having reported it before). So thanks again for the report! Best Tomas On 08/16/2018 10:06 AM, Tomas Kalibera wrote: Dear Barba

[Rd] Relevel confusing with numeric value

2018-10-02 Thread Emil Bode
Something that bit me: The function relevel takes a factor, and a reference level to be promoted to the first place. If “ref” is a character this level is promoted, if it’s a numeric the “ref”-th level is promoted. Which turns out to be very confusing if you have factor with numeric values (e.g.

Re: [Rd] Relevel confusing with numeric value

2018-10-02 Thread peter dalgaard
In a word, no. It is behaving as documented and adding a warning would just confuse others who have been using the feature as intended. This belongs in the same bin as "as.integer(f) vs as.integer(as.character(f))" and "x[f] vs. x[as.character(f)]" -pd > On 2 Oct 2018, at 17:18 , Emil Bode

[Rd] maximum matrix size

2018-10-02 Thread Therneau, Terry M., Ph.D. via R-devel
I am now getting the occasional complaint about survival routines that are not able to handle big data.   I looked in the manuals to try and update my understanding of max vector size, max matrix, max data set, etc; but it is either not there or I missed it (the latter more likely).   Is it s

Re: [Rd] maximum matrix size

2018-10-02 Thread Henrik Bengtsson
On Tue, Oct 2, 2018 at 9:43 AM Therneau, Terry M., Ph.D. via R-devel wrote: > > I am now getting the occasional complaint about survival routines that are > not able to > handle big data. I looked in the manuals to try and update my understanding > of max > vector size, max matrix, max data se

Re: [Rd] Problem with parseData

2018-10-02 Thread Barbara Lerner
Thanks!  Please let us know when it is in the released version of R. Barbara Tomas Kalibera wrote on 10/2/18 6:37 AM: > The fix is now in R-devel, 75386. I have not ported to R-patched, > because the fix breaks two packages which are working around this bug > (and to my knowledge without having

Re: [Rd] maximum matrix size

2018-10-02 Thread Peter Langfelder
Does this help a little? https://cran.r-project.org/doc/manuals/r-release/R-ints.html#Long-vectors One thing I seem to remember but cannot find a reference for is that long vectors can only be passed to .Call calls, not C/Fortran. I remember rewriting .C() in my WGCNA package to .Call for this ve

[Rd] R grpc

2018-10-02 Thread Witold E Wolski
Hello, I am looking for a prebuild - binary MS Windows version of the R grpc package https://github.com/nfultz/grpc best regards Witek -- Witold Eryk Wolski __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] R grpc

2018-10-02 Thread Rui Barradas
Hello, Do you really need a prebuild binary? Wouldn't this do it? devtools::install_github("nfultz/grpc") Hope this helps, Rui Barradas Às 20:14 de 02/10/2018, Witold E Wolski escreveu: Hello, I am looking for a prebuild - binary MS Windows version of the R grpc package https://github.com/

Re: [Rd] R grpc

2018-10-02 Thread Witold E Wolski
:) Did you missed the "MS-Windows" in my e-mail? On Tue, 2 Oct 2018 at 21:28, Rui Barradas wrote: > > Hello, > > Do you really need a prebuild binary? Wouldn't this do it? > > devtools::install_github("nfultz/grpc") > > > Hope this helps, > > Rui Barradas > > Às 20:14 de 02/10/2018, Witold E Wol

[Rd] How do I set a compile flag _WIN32_WINNT=0x600 in Makevars.Win

2018-10-02 Thread Witold E Wolski
Sorry for bothering you I am trying to build the R grpc package on windows: https://github.com/nfultz/grpc against an MSYS2 build of grpc. when running devtools::install() I am getting the following error: C:/msys64/mingw64/include/grpc/impl/codegen/port_platform.h:47:2: error: #error "Please c

[Rd] grDevices::convertColor and colorRamp(space='Lab') Performance Improvements

2018-10-02 Thread Brodie Gaslam via R-devel
`grDevices::convertColor` performance can be improved by 30-300x with small changes to the code. `colorRamp(space='Lab')` uses `convertColor` so it too benefits from substantial performance gains. `convertColor` vectorizes explicitly over the rows of the input color matrix using `apply`. The