Re: [Rd] (no subject)

2013-09-21 Thread Ben Bolker
Henrik Bengtsson biostat.ucsf.edu> writes: > > On Fri, Aug 30, 2013 at 11:51 AM, Henrik Bengtsson > biostat.ucsf.edu> wrote: > > Hi. [snip] Bump ... Henrik, did you ever post this as a request/wishlist at https://bugs.r-project.org/bugzilla3/ ? (I don't think so, I couldn't find it there,

Re: [Rd] (no subject)

2013-09-21 Thread Henrik Bengtsson
Hi, it appears that you've lost the original thread R-devel thread '"False" warning on "replacing previous import" when re-exporting identical object' started on 2013-08-29 [https://stat.ethz.ch/pipermail/r-devel/2013-August/067321.html]. (and forgot the subject line), so in order to not start ye

Re: [Rd] "False" warning on "replacing previous import" when re-exporting identical object

2013-09-21 Thread Henrik Bengtsson
On Sat, Sep 21, 2013 at 9:44 AM, Ben Bolker wrote: > Henrik Bengtsson biostat.ucsf.edu> writes: > >> >> On Fri, Aug 30, 2013 at 11:51 AM, Henrik Bengtsson >> biostat.ucsf.edu> wrote: >> > Hi. > > [snip] > > Bump ... Henrik, did you ever post this as a request/wishlist at > https://bugs.r-proje

[Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Tobias Verbeke
L.S. In this bug report https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14493#c1 it is mentioned that after moving an R installation one should regenerate the Rscript executable. Is there an easy way to do so (after an R installation has been moved)? I have not found any information in th

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Dirk Eddelbuettel
On 21 September 2013 at 20:43, Tobias Verbeke wrote: | P.S. The background to this question is the usage of Rscript | calls in the Makevars files of some R packages on CRAN, so | the 'broken' Rscript prevents installation of certain R packages. More details, please. AFAICT there is no 'broken'

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Tobias Verbeke
Hi Dirk, Many thanks for your reaction. - Original Message - > From: "Dirk Eddelbuettel" > To: "Tobias Verbeke" > Cc: r-devel@r-project.org > Sent: Saturday, September 21, 2013 9:00:12 PM > Subject: Re: [Rd] regenerate Rscript after moving R installation > > > On 21 September 2013 at

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Dirk Eddelbuettel
Tobias, On 21 September 2013 at 21:39, Tobias Verbeke wrote: | The package that made me discover this was RcppEigen which has indeed Never heard of it :) | PKG_LIBS=`$(R_HOME)/bin/Rscript -e "Rcpp:::LdFlags()"` $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) | | > where a key part is the `$(R_HOME)/bi

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Tobias Verbeke
Hi Dirk, - Original Message - > From: "Dirk Eddelbuettel" > To: "Tobias Verbeke" > Cc: "Dirk Eddelbuettel" , r-devel@r-project.org > Sent: Saturday, September 21, 2013 11:03:37 PM > Subject: Re: [Rd] regenerate Rscript after moving R installation > > > Tobias, > > On 21 September 201

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Simon Urbanek
On Sep 21, 2013, at 8:43 PM, Tobias Verbeke wrote: > L.S. > > In this bug report > > https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14493#c1 > > it is mentioned that after moving an R installation > one should regenerate the Rscript executable. > > Is there an easy way to do so (after

Re: [Rd] regenerate Rscript after moving R installation

2013-09-21 Thread Simon Urbanek
I forgot to mention that some packages bake-in paths as well, so even if you fix both R and Rscript, it will still not work in general. On Sep 22, 2013, at 3:42 AM, Simon Urbanek wrote: > On Sep 21, 2013, at 8:43 PM, Tobias Verbeke > wrote: > >> L.S. >> >> In this bug report >> >> https://