Re: [Rd] Makevars or congiure for multi platforms

2008-06-08 Thread Laurent Gautier
2008/6/7 <[EMAIL PROTECTED]>: > > Message: 11 > Date: Sat, 7 Jun 2008 03:38:23 +0900 > From: "Tadashi Kadowaki" <[EMAIL PROTECTED]> > Subject: [Rd] Makevars or congiure for multi platforms > To: r-devel@r-project.org > Message-ID: ><[EMAIL PROTECTED]> > Content-Type: text/plain; charset=IS

Re: [Rd] RFC: Add 'postinstall' hook to R CMD INSTALL ?

2008-06-08 Thread Dirk Eddelbuettel
Brian, On 6 June 2008 at 07:33, Dirk Eddelbuettel wrote: | | On 6 June 2008 at 13:13, Prof Brian Ripley wrote: | | > On 6 June 2008 at 11:34, Prof Brian Ripley wrote: | | > | Isn't this what Type: Frontend is for? That gives you complete control | | > | and would seem appropriate for both of yo

Re: [Rd] Makevars or congiure for multi platforms

2008-06-08 Thread Tadashi Kadowaki
Hi, Laurent and Tobias Thanks a lot. I could make configure script and upload it to r-forge. https://r-forge.r-project.org/projects/pdf2/ It still works only on mac by default. For Linux and Windows, it needs additional option like - R CMD INSTALL --configure-vars="R_INTERNAL_HEADER_DIR=/path

Re: [Rd] slot(obj, "nosuch") documentation question

2008-06-08 Thread John Chambers
Paul Roebuck wrote: Using slot() on object (or "@") and using a nonexistent slotname returns an error (see example code). R> setClass("foobar", representation=list(a="numeric")) [1] "foobar" R> foobar <- new("foobar", a=5) R> [EMAIL PROTECTED] [1] 5 R> [EMAIL PROTECTED] Error: no slot of name "b

[Rd] R CMD CHECK WARNING inappropriate for S4 method?

2008-06-08 Thread Martin Morgan
The package 'graph' defines classes graph and graphNEL (extending graph) and a union,graph,graph-method. These are all exported and fully documented. The package 'GSEABase' Imports: graph and importClassesFrom(graph, graphNEL). GSEABase defines methods on union for its own classes (not graph / gra

Re: [Rd] slot(obj, "nosuch") documentation question

2008-06-08 Thread Martin Morgan
John Chambers <[EMAIL PROTECTED]> writes: > Paul Roebuck wrote: >> Using slot() on object (or "@") and using a nonexistent >> slotname returns an error (see example code). [snip] >> This is in reference to writing method that might be >> passed an object created by previous version of software,

[Rd] SHLIB_CXXLDFLAGS needs quotes on Solaris section of admin manual.

2008-06-08 Thread Dr. David Kirkby
In the admin manual, there is some information about flags etc for Solaris: CC="cc -xc99" CPPFLAGS=-I/opt/csw/include CFLAGS="-O -xlibmieee" F77=f95 FFLAGS=-O4 CXX=CC CXXFLAGS=-O FC=f95 FCFLAGS=$FFLAGS LDFLAGS=-L/opt/csw/lib SHLIB_CXXLDFLAGS=-G -lCstd Where as the CC command is quoted, the SHLIB

Re: [Rd] SHLIB_CXXLDFLAGS needs quotes on Solaris section of admin manual.

2008-06-08 Thread Dr. David Kirkby
Dr. David Kirkby wrote: In the admin manual, there is some information about flags etc for Solaris: CC="cc -xc99" CPPFLAGS=-I/opt/csw/include CFLAGS="-O -xlibmieee" F77=f95 FFLAGS=-O4 CXX=CC CXXFLAGS=-O FC=f95 FCFLAGS=$FFLAGS LDFLAGS=-L/opt/csw/lib SHLIB_CXXLDFLAGS=-G -lCstd Where as the CC co

[Rd] eigenvector dimname convention?

2008-06-08 Thread Spencer Graves
What are reasonable conventions for dimnames for eigenvectors? The standard 'eigen' function discards dimnames. If a matrix X is symmetric (and rownames = colnames), it seems more sensible to assign rownames(eigen(X)$vectors) <- rownames(X). The eigenvalues seem different, so

Re: [Rd] Makevars or congiure for multi platforms

2008-06-08 Thread Prof Brian Ripley
Private headers are just that, private. They are not intended to be available to packages, and not installed by the standard R makefiles on either Unix-alikes or Windows. I don't see it documented that they are available on MacOS X, and will leave it to that platform's maintainers as to why t

[Rd] Issue with NA value and Octave compatibility

2008-06-08 Thread David Bateman
Dear R developers, I'm an Octave developer in the process of implementing a single precision type in Octave and I have an issue with the NA value. The choice of NA value in Octave was made a few years back so that the high word of the NA value was 0x7ff0 and the low word was 0x07A2 for com

[Rd] R and Gnumeric

2008-06-08 Thread Jean Bréfort
Hi, I just read the "Embedding R in Gnumeric" idea at http://www.r-project.org/SoC08/ideas.html. On my side, I intend to add as many statistics related plot types to the current gnumeric charting engine as possible. We already have boxplots and partial support for histograms. My immediate plans ar

Re: [Rd] R-code embedded in VBE -- Type mismatch errors

2008-06-08 Thread Thomas Baier
Pietro, [EMAIL PROTECTED] wrote: > Hello, > > I am trying to embed R-code inside VB for Excel (probably a perverse > endeavour anyway) and I am running into difficulties, especially when > passing vectors back and forth between the two environments. > > (1) I am using the RExcel package. There