Re: [Rd] Doing the right amount of copy for large data frames.

2008-04-15 Thread Prof Brian Ripley
On Mon, 14 Apr 2008, Gopi Goswami wrote: > Dear All, > > > Thanks a lot for your helpful comments (e.g., NAMED, ExpressionSet, > DNAStringSet). > > > Observations and questions :: > > ooo For a data.frame dd and a list ll with same contents to being with, > the following operations show signific

[Rd] Pb with validObject(..., complete=TRUE)

2008-04-15 Thread Herve Pages
Hi, When called with complete=TRUE, validObject() is supposed to work in a recursive manner. But here is a situation where it doesn't seem to be the case. Let's define a class with a validity method: setClass("PosInts", representation(ii="integer")) setValidity("PosInts", function(ob

[Rd] Sage <--> R integration

2008-04-15 Thread William Stein
Hi R-Devel, The Sage project (http://www.sagemath.org) has been working extremely hard for several years to create a viable free open source alternative to Maple, Matlab, Mathematica, and Magma. Numerous users have requested statistical functionality. Though Sage includes scipy and numpy, which ha

[Rd] including additional packages in Recommended

2008-04-15 Thread Sundar Dorai-Raj
Hi, R-devel, I'm trying to create a modified distribution of R to include several packages are not part of the CRAN version. I.e. When I untar R-2.6.2.tar.gz I would like to include my package "foo_1.0-0.tar.gz" in 'src/library/Recommended' so that when a user builds my version of R they also

Re: [Rd] including additional packages in Recommended

2008-04-15 Thread Prof Brian Ripley
Look in share/make/vars.mk. BASE means base, not recommended, believe it or not. You would need to add to R_PKGS_RECOMMENDED_SOURCES and R_PKGS_RECOMMENDED. On Tue, 15 Apr 2008, Sundar Dorai-Raj wrote: > Hi, R-devel, > > I'm trying to create a modified distribution of R to include several > p

Re: [Rd] clean-up actions after non-local exits

2008-04-15 Thread Vadim Organovich
Thank you, Luke! Regarding user interrupts. R-ext mentions that those could be suppressed by setting R_SignalHandlers to 0. So if I do so in my clean up code I should be good, shouldn't I? Thanks, Vadim From: Luke Tierney [EMAIL PROTECTED] Sent: Monday,

Re: [Rd] including additional packages in Recommended

2008-04-15 Thread Sundar Dorai-Raj
Hi, Prof. Ripley (and Berwin for his off-list reply), Thanks for the reply. Yes, I know this is not the recommended mode. I guessed as much when I could not find a simple answer in R-admin. The is actually our current mode of installation at the client. But some suggestions from management have

[Rd] obstacles to using vectors with attributes

2008-04-15 Thread Jim Regetz
Hi all, I am working on an application in which we'd like to use attributes to attach simple metadata to arbitrary R objects. It is essential that all functions that will work on the original object will also work on the object after metadata attributes have been added. However, this is not al