[Rd] pcalg: labels

2007-11-26 Thread Peter Danenberg
I never got a response from pcalg's maintainer, so I thought I'd publisher a patch here that allows you to specify optional node-labels; when no labels are specified, `plot' falls back on the default behaviour of labelling nodes sequentially. diff -Naur pcalg-orig/R/pcalg.R pcalg/R/pcalg.R --- pcal

[Rd] Problem with configure's detection of glob on 2.6.0 (PR#10468)

2007-11-26 Thread m . pacey
Full_Name: Mike Pacey Version: 2.6.0 OS: SuSe Linux 9.3 x86_64 Submission from: (NULL) (194.80.32.10) A "vanilla" version of R configures and compiles without a problem on my system. Switching to using the PGI compiler configures correctly (see the values at the bottom fo thismessage), but compi

Re: [Rd] Problem with configure's detection of glob on 2.6.0 (PR#10468)

2007-11-26 Thread ripley
I've no idea about the glob detection, but clearly this is the first system that allegedly lacks glob that we have encountered: the file needs to be #if defined(HAVE_GLOB) || defined(Win32) glob_t globbuf; #endif Have fixed that for 2.6.1 patched. On Mon, 26 Nov 2007, [EMAIL PROTECTED] wr

[Rd] Levy (PR#10469)

2007-11-26 Thread vincent . remacle
Full_Name: Vincent Remacle Version: 2.5.1 OS: Windows XP Submission from: (NULL) (81.246.37.50) > fit = vglm(x ~ 1, levy(idelta=2,igamma=2),trace=TRUE) Error: cannot allocate vector of size 30.5 Mb In addition: Warning messages: 1: NaNs produced in: log(x) 2: Reached total allocation of 1015Mb

[Rd] colnames slow (PR#10470)

2007-11-26 Thread tomas . larsson
Full_Name: Tomas Larsson Version: 2.6.0 OS: Windows XP Submission from: (NULL) (198.208.251.24) This is not a bug, it is a performance issue but I think it should have an easy fix. I have a large matrix (about 2,000,000 by 20), when I type colnames(x) it takes a long time to get the result. How

Re: [Rd] colnames slow (PR#10470)

2007-11-26 Thread Uwe Ligges
[EMAIL PROTECTED] wrote: > Full_Name: Tomas Larsson > Version: 2.6.0 > OS: Windows XP > Submission from: (NULL) (198.208.251.24) > > > This is not a bug, it is a performance issue but I think it should have an > easy > fix. > > I have a large matrix (about 2,000,000 by 20), when I type colnam

Re: [Rd] Levy (PR#10469)

2007-11-26 Thread Uwe Ligges
[EMAIL PROTECTED] wrote: > Full_Name: Vincent Remacle > Version: 2.5.1 Please see the FAQs on how to report bugs. R-2.5.1 is two releases older than required. > OS: Windows XP > Submission from: (NULL) (81.246.37.50) > > >> fit = vglm(x ~ 1, levy(idelta=2,igamma=2),trace=TRUE) - What is

[Rd] Change in write.dcf() that breaks existing code

2007-11-26 Thread Herve Pages
Hi, When writing a DCF file one record at a time, the records used to be separated by an empty line in R-2.5, but not in R-2.6: x <- data.frame(aa=letters[1:3], ii=1:3) With R-2.5: > x <- data.frame(aa=letters[1:3], ii=1:3) > for (i in seq_len(nrow(x))) write.dcf(x[i, ,drop=FALSE]) aa: