[Rd] Problem with rgl into MAC OS X

2007-10-05 Thread Gustavo H. Esteves
Dear R Developers, I'm developing an R package that I had submitted to Bioconductor project. This package uses the rgl package to do some tri-dimensional scatter pĺots. I only work with linux (ubuntu 7.04) system and Windows XP. In both of them the rgl package works fine. But now, bioconductor te

Re: [Rd] Building package with R 2.6.0 on Windows/Cygwin gives error with tar

2007-10-05 Thread Prof Brian Ripley
Try setting TAR to 'tar --force-local'. This should be the default under Windows, but a typo was introduced in R 2.6.0 after it was tested. On Thu, 4 Oct 2007, Kevin Wright wrote: > My setup: > Windows XP, R-2.6.0, Cygwin (not the Rtools version) > > When I tried to build a package, I was given

[Rd] R-2.6.0 package check problems

2007-10-05 Thread Robin Hankin
Hello One of my packages, untb_1.3-2, passes R CMD check under MacOSX (and apparently the systems used in the package check summary page on CRAN) but fails with the following message on R-2.6.0.tgz compiled last night on my (home) linux box. I hasten to add that I have never seen this error befo

Re: [Rd] R-2.6.0 package check problems

2007-10-05 Thread Uwe Ligges
Robin Hankin wrote: > Hello > > > One of my packages, untb_1.3-2, passes R CMD check under > MacOSX (and apparently the systems used in the package check > summary page on CRAN) but fails with the following message on > R-2.6.0.tgz compiled last night on my (home) linux box. I hasten > to add

Re: [Rd] R-2.6.0 package check problems

2007-10-05 Thread Thomas Petzoldt
Robin Hankin wrote: > Hello > > > One of my packages, untb_1.3-2, passes R CMD check under > MacOSX (and apparently the systems used in the package check > summary page on CRAN) but fails with the following message on > R-2.6.0.tgz compiled last night on my (home) linux box. I hasten > to

Re: [Rd] Building package with R 2.6.0 on Windows/Cygwin gives error with tar

2007-10-05 Thread Kevin Wright
I tried setenv TAR="tar --force-local" and also tried changing the build script directly to R_system(join(" ", ("tar --force-local -chf", &shell_quote_file_path($filepath), "$pkgname"))); but still had this error: tar: Cannot execute remot

[Rd] problem with building package in R 2.6.0

2007-10-05 Thread G.J.A.Fox
Hello, I can nolonger build R packages in R 2.6.0 (win xp). I get the error message 'sh' is not recognized as an internal or external command. In earlier versions of R I had no problems. Maybe that someone can help me with this. Jean-Paul Fox. C:\PROGRA~1\R\R-2.6.0\bin>Rcmd build

Re: [Rd] problem with building package in R 2.6.0

2007-10-05 Thread Prof Brian Ripley
On Fri, 5 Oct 2007, [EMAIL PROTECTED] wrote: > Hello, > > > > I can nolonger build R packages in R 2.6.0 (win xp). I get the error > message 'sh' is not recognized as an internal > > or external command. In earlier versions of R I had no problems. Maybe > that someone can help me with this. You c

[Rd] 'R CMD build' and file permissions

2007-10-05 Thread Herve Pages
Hi, When building a source package on Linux with 'R CMD build', the files in the resulting tarball don't have the original permissions. The problem is that the packages I want to build include an SQLite data base (an .sqlite file) and, before I run 'R CMD build', I've made this file read-only (chm