[Rd] Having rbind dispatch to a different method than data.frame with arguments inheriting from data.frame

2007-03-20 Thread Ken Knoblauch
I have defined an S3 class that inherits from data.frame. It has some additional attributes and a particular structure that a modeling function that I wrote require. I want to write an rbind method for this class which will combine the attributes correctly as well as the data.frame components.

Re: [Rd] -std=c99 and inline semantics

2007-03-20 Thread Prof Brian Ripley
As even 4.2.0 is not released yet, we will make changes at an appropriate time. The GNU and C99 semantics for 'inline' are known to be incompatible. >From src/include/Rinlinedfuns.h: /* this header is always to be included from others. It is only called if COMPILING_R is defined (in util.c

[Rd] nclass.scott() and nclass.FD() {Re: [R] truehist bug?}

2007-03-20 Thread Martin Maechler
[This has become entirely a topic for 'R-devel' hence, I'm diverting to there keeping R-help once; please follow-up only to R-devel ] > "MM" == Martin Maechler <[EMAIL PROTECTED]> > on Tue, 20 Mar 2007 08:49:16 +0100 writes: > "Gad" == Gad Abraham <[EMAIL PROTECTED]> > o

[Rd] Symbol and Ellipsis problems

2007-03-20 Thread Thomas McCallum
Hi Everyone, When I have a load of functions which have various arguments passed via the ellipsis argument it keeps on assigning them as symbol making them unusable to the function. My current work around involves using do.call but this is rather cumbersome. Does anyone know why it suddenly chan

Re: [Rd] Symbol and Ellipsis problems

2007-03-20 Thread Duncan Murdoch
On 3/20/2007 6:36 AM, Thomas McCallum wrote: > Hi Everyone, > > When I have a load of functions which have various arguments passed > via the ellipsis argument it keeps on assigning them as symbol making > them unusable to the function. My current work around involves using > do.call but this is

Re: [Rd] Carriage returns and Sweave output

2007-03-20 Thread Ernest Turro
On 20 Mar 2007, at 07:53, Martin Maechler wrote: >> "Wolfi" == Wolfgang Huber <[EMAIL PROTECTED]> >> on Mon, 19 Mar 2007 15:38:00 + writes: > >>> the problem with results=hide is that it suppresses everything. I >>> just >>> need Sweave to suppress strings ending in '\r'... > >

Re: [Rd] Carriage returns and Sweave output

2007-03-20 Thread Douglas Bates
On 3/20/07, Ernest Turro <[EMAIL PROTECTED]> wrote: > > On 20 Mar 2007, at 07:53, Martin Maechler wrote: > > >> "Wolfi" == Wolfgang Huber <[EMAIL PROTECTED]> > >> on Mon, 19 Mar 2007 15:38:00 + writes: > > > >>> the problem with results=hide is that it suppresses everything. I > >>>

Re: [Rd] R 2.5.0 devel try issue in conjuntion with S4 method dispatch

2007-03-20 Thread ml-it-r-devel
Peter Dalgaard wrote: > Matthias Burger wrote: >> Hi Seth, >> > [...] >> > I have just committed my variation of Seth's patch, so please check the > current r-devel too. For the record: With R 2.5.0 devel (2007-03-18 r40854) the issue I was concerned about has been resolved. Thanks t

[Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread charles . dupont
Full_Name: Charles Dupont Version: 2.4.1 OS: linux 2.6.18 Submission from: (NULL) (160.129.129.136) 'format.pval' has a major limitation in its implementation. For example suppose a person had a vector like 'a' and the error being ±0.001. > a <- c(0.1, 0.3, 0.4, 0.5, 0.3, 0.0001) > forma

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread murdoch
On 3/20/2007 11:19 AM, [EMAIL PROTECTED] wrote: > Full_Name: Charles Dupont > Version: 2.4.1 > OS: linux 2.6.18 > Submission from: (NULL) (160.129.129.136) > > > 'format.pval' has a major limitation in its implementation. For example > suppose a person had a vector like 'a' and the error being ±0

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Gabor Grothendieck
On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > On 3/20/2007 11:19 AM, [EMAIL PROTECTED] wrote: > > Full_Name: Charles Dupont > > Version: 2.4.1 > > OS: linux 2.6.18 > > Submission from: (NULL) (160.129.129.136) > > > > > > 'format.pval' has a major limitation in its implementation. For

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Duncan Murdoch
On 3/20/2007 12:44 PM, Gabor Grothendieck wrote: > On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: >> On 3/20/2007 11:19 AM, [EMAIL PROTECTED] wrote: >> > Full_Name: Charles Dupont >> > Version: 2.4.1 >> > OS: linux 2.6.18 >> > Submission from: (NULL) (160.129.129.136) >> > >> > >> > 'form

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Gabor Grothendieck
On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > On 3/20/2007 12:44 PM, Gabor Grothendieck wrote: > > On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > >> On 3/20/2007 11:19 AM, [EMAIL PROTECTED] wrote: > >> > Full_Name: Charles Dupont > >> > Version: 2.4.1 > >> > OS: linux 2.6.18 >

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Duncan Murdoch
On 3/20/2007 1:40 PM, Gabor Grothendieck wrote: > On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: >> On 3/20/2007 12:44 PM, Gabor Grothendieck wrote: >> > On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: >> >> On 3/20/2007 11:19 AM, [EMAIL PROTECTED] wrote: >> >> > Full_Name: Charles

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread hadley wickham
On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > On 3/20/2007 1:40 PM, Gabor Grothendieck wrote: > > On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > >> On 3/20/2007 12:44 PM, Gabor Grothendieck wrote: > >> > On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > >> >> On 3/20/200

[Rd] PKG_CFLAGS/CFLAGS and PKG_CXXFLAGS/CXXFLAGS

2007-03-20 Thread Ernest Turro
Why is it that R places CFLAGS after PKG_CFLAGS and not before when compiling a package (e.g. through R CMD build pkg)? This can be problematic if, for instance, you want to use -O3, but -O2 is in R_HOME/etc/Makeconf. If -O2 (in CFLAGS) appears after -O3 (in PKG_CFLAGS), you are left with w

Re: [Rd] Carriage returns and Sweave output

2007-03-20 Thread Ernest Turro
On 20 Mar 2007, at 13:24, Douglas Bates wrote: > [snip] > In cases like this capture.output() is your friend. Write one code > chunk with results=hide,echo=FALSE that uses capture.output to trap > the desired output as character strings then use string manipulation > functions to do the desired

Re: [Rd] PKG_CFLAGS/CFLAGS and PKG_CXXFLAGS/CXXFLAGS

2007-03-20 Thread Kasper Daniel Hansen
On Mar 20, 2007, at 7:58 PM, Ernest Turro wrote: > Why is it that R places CFLAGS after PKG_CFLAGS and not before when > compiling a package (e.g. through R CMD build pkg)? This can be > problematic if, for instance, you want to use -O3, but -O2 is in > R_HOME/etc/Makeconf. If -O2 (in CFLAGS) app

Re: [Rd] PKG_CFLAGS/CFLAGS and PKG_CXXFLAGS/CXXFLAGS

2007-03-20 Thread Ernest Turro
On 20 Mar 2007, at 21:32, Kasper Daniel Hansen wrote: > > On Mar 20, 2007, at 7:58 PM, Ernest Turro wrote: > >> Why is it that R places CFLAGS after PKG_CFLAGS and not before when >> compiling a package (e.g. through R CMD build pkg)? This can be >> problematic if, for instance, you want to use -

[Rd] cbind() & rbind() for S4 objects -- 'Matrix' package changes

2007-03-20 Thread Martin Maechler
As some of you may have seen / heard in the past, it is not possible to make cbind() and rbind() into proper S4 generic functions, since their first formal argument is '...'. [ BTW: S3-methods for these of course only dispatch on the first argument which is also not really satisfactory in the con

Re: [Rd] [R-downunder] las with stripchart

2007-03-20 Thread John Maindonald
Hi Ross - I believe I was wrong in thinking that passing via the ... list to stripchart() was ever allowed. Here are patches: Add ... to the argument list Add, at the beginning of the function: pars <- list(...) There are two calls to axis(). Modify these to: axis(1, at = at, labels =

Re: [Rd] PKG_CFLAGS/CFLAGS and PKG_CXXFLAGS/CXXFLAGS

2007-03-20 Thread Dirk Eddelbuettel
On 20 March 2007 at 18:58, Ernest Turro wrote: | Why is it that R places CFLAGS after PKG_CFLAGS and not before when | compiling a package (e.g. through R CMD build pkg)? This can be | problematic if, for instance, you want to use -O3, but -O2 is in | R_HOME/etc/Makeconf. If -O2 (in CFLAGS)

Re: [Rd] cbind() & rbind() for S4 objects -- 'Matrix' package changes

2007-03-20 Thread Luke Tierney
On Tue, 20 Mar 2007, Martin Maechler wrote: > As some of you may have seen / heard in the past, > it is not possible to make cbind() and rbind() into proper S4 > generic functions, since their first formal argument is '...'. > [ BTW: S3-methods for these of course only dispatch on the first > arg

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Gabor Grothendieck
On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > On 3/20/2007 1:40 PM, Gabor Grothendieck wrote: > > On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > >> On 3/20/2007 12:44 PM, Gabor Grothendieck wrote: > >> > On 3/20/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > >> >> On 3/20/200

Re: [Rd] wishlist -- Fix for major format.pval limitation (PR#9574)

2007-03-20 Thread Martin Maechler
> "Gabor" == Gabor Grothendieck <[EMAIL PROTECTED]> > on Tue, 20 Mar 2007 22:10:27 -0400 writes: Gabor> On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: >> On 3/20/2007 1:40 PM, Gabor Grothendieck wrote: >> > On 3/20/07, Duncan Murdoch <[EMAIL PROTECTED]> wrote: >>