Re: [Rd] blas test problem

2014-07-11 Thread lejeczek
On 10/07/14 06:45, Prof Brian Ripley wrote: On 09/07/2014 17:17, lejeczek wrote: I wonder if anyone amongst developers had a chance to try ACML. Yes, and documented its use in the R manual over many years. AMD's implementation when R is supposed to use it seems to fail the test similarly,

Re: [Rd] blas test problem

2014-07-09 Thread Prof Brian Ripley
On 09/07/2014 17:17, lejeczek wrote: I wonder if anyone amongst developers had a chance to try ACML. Yes, and documented its use in the R manual over many years. AMD's implementation when R is supposed to use it seems to fail the test similarly, Please do read the manual for yourself (see t

Re: [Rd] blas test problem

2014-07-09 Thread lejeczek
I wonder if anyone amongst developers had a chance to try ACML. AMD's implementation when R is supposed to use it seems to fail the test similarly, on a side note, I had R build with ACML and performance-wise it looked really really promising, however now http://r.research.att.com/benchmarks/

Re: [Rd] blas test problem

2014-07-07 Thread Martyn Plummer
I can reproduce this. It is a bug in reference BLAS. With the R 3.1.0 release, Fedora changed from using the internal BLAS that comes with R to using external BLAS. But reference BLAS does not handle missing values correctly. I expect this has been true since at least 2010, when Brian patched the

Re: [Rd] blas test problem

2014-07-04 Thread lejeczek
later I tried plain-vanilla, well.. redhats' and derivatives default packages and they all fail: > ## PR#4582 %*% with NAs > stopifnot(is.na(NA %*% 0), is.na(0 %*% NA)) > ## depended on the BLAS in use. > > > ## found from fallback test in slam 0.1-15 > ## most likely indicates an inaedquate BLA

Re: [Rd] blas test problem

2014-06-30 Thread peter dalgaard
It is not clear what you mean: The quoted page lists particular AMD BLAS versions that fail R's regression test. Other builds of R would run the regression test during building and you can run them yourself if you get the source code (for good measure, use the current version, not one from a 2

[Rd] blas test problem

2014-06-27 Thread lejeczek
dear developers I myself am not a prog-devel, I found this http://devgurus.amd.com/message/1255852#1255852 Most R compilations/installations I use seem to fail this test, is this a problem and if yes then how serious is it? regards __ R-devel@r-pr