Re: [Rd] Imports problem

2015-02-16 Thread Therneau, Terry M., Ph.D.
On 02/16/2015 07:35 AM, Duncan Murdoch wrote: If you are depending on nlme, you don't also need to import it. But it is generally a good practice to avoid either modifying or relying on the search list: as people get more packages there, there are more chances for clashes. I would suggest adding

Re: [Rd] Imports problem

2015-02-16 Thread Uwe Ligges
On 16.02.2015 14:35, Duncan Murdoch wrote: On 16/02/2015 8:20 AM, Therneau, Terry M., Ph.D. wrote: > I'm testing out a new version of coxme and R CMD check fails with "could not find function > ranef" (or random.effects or fixef, or anything from nlme). The NAMESPACE file has t

Re: [Rd] Imports problem

2015-02-16 Thread Duncan Murdoch
On 16/02/2015 8:20 AM, Therneau, Terry M., Ph.D. wrote: > >> > I'm testing out a new version of coxme and R CMD check fails with >> "could not find function >> > ranef" (or random.effects or fixef, or anything from nlme). The >> NAMESPACE file has the >> > line below >> >> >

Re: [Rd] Imports problem

2015-02-16 Thread Therneau, Terry M., Ph.D.
> I'm testing out a new version of coxme and R CMD check fails with "could not find function > ranef" (or random.effects or fixef, or anything from nlme). The NAMESPACE file has the > line below > importFrom(nlme, ranef, random.effects, fixef, fixed.effects, VarCorr)

Re: [Rd] Imports problem

2015-02-16 Thread Duncan Murdoch
On 16/02/2015 4:32 AM, Martin Maechler wrote: >> Therneau, Terry M , Ph D >> on Sun, 15 Feb 2015 17:31:00 -0600 writes: > > > I'm testing out a new version of coxme and R CMD check fails with > "could not find function > > ranef" (or random.effects or fixef, or anything from

Re: [Rd] Imports problem

2015-02-16 Thread Martin Maechler
> Therneau, Terry M , Ph D > on Sun, 15 Feb 2015 17:31:00 -0600 writes: > I'm testing out a new version of coxme and R CMD check fails with "could not find function > ranef" (or random.effects or fixef, or anything from nlme). The NAMESPACE file has the > line below

[Rd] Imports problem

2015-02-15 Thread Therneau, Terry M., Ph.D.
I'm testing out a new version of coxme and R CMD check fails with "could not find function ranef" (or random.effects or fixef, or anything from nlme). The NAMESPACE file has the line below importFrom(nlme, ranef, random.effects, fixef, fixed.effects, VarCorr) and nlme is declared in the DES