Dear Henrik,
Thank you for your extensive reply, using:
Sweave("QAReport.Rnw")
tools::texi2pdf("QAReport.tex", clean = TRUE)
did solve my problem.
Nevertheless, I do not understand why function buildVignettes() was
modified in a way that it can no longer be used to create vignettes for
testi
Ok. ...I've now read your original thread more carefully, and I'd say
that tools::buildVignettes() is intended for building vignettes within
packages, not for compiling vignette files in general. This is most
likely why it complains - it simply looks for files that it expect to
see in a package s
Dear Henrik,
Thank you for your suggestion, however the error was detected by a user
who is already using R 3.0.1, see:
https://www.stat.math.ethz.ch/pipermail/bioconductor/2013-August/054633.html
Best regards,
Christian
On 8/28/13 11:49 PM, Henrik Bengtsson wrote:
sessionInfo()
R version
> > sessionInfo()
> R version 3.0.0 Patched (2013-04-11 r62551)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
I would check with R 3.0.1 patched and R devel before anything else,
especially when troubleshooting vignette-related issues.
/Henrik
On Wed, Aug 28, 2013 at 12:33 PM, cstrato wrote:
Dear all,
When running function 'testQAReport()', which uses function
'buildVignettes()' to create a pdf-file I get the following error:
> source("testQAReport.R")
> testQAReport()
Error in .get_package_metadata(pkgdir) :
Files 'DESCRIPTION' and 'DESCRIPTION.in' are missing.
Since I did not