Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-14 Thread Matthew Dowle
Matthew Dowle mdowle.plus.com> writes: > > Will check R-Forge again when it catches up. Thanks. > Matthew > Just to confirm, R-Forge has today caught up and is now using R r59554 which includes the fix for the problem in this thread. Its binary build of data.table is now installing fine on R

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Matthew Dowle
I built R-trunk (rev 59537), ran 'Rtrunk CMD build data.table', installed the resulting tar.gz into R release and it ran tests ok. So it seems ok now, if that tested it right. Will check R-Forge again when it catches up. Thanks. Matthew On Wed, 2012-06-06 at 22:04 +0200, peter dalgaard wrote: > FY

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Matthew Dowle
> On 07/06/2012 12:49, Matthew Dowle wrote: >>> On 07/06/2012 11:40, Matthew Dowle wrote: Prof Ripley wrote : > That Depends line is about source installs. I can't see that documented in either Writing R Extensions or ?install.packages. Is it somewhere else? I thought D

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Simon Urbanek
On Jun 7, 2012, at 7:49 AM, Matthew Dowle wrote: >> On 07/06/2012 11:40, Matthew Dowle wrote: >>> >>> Prof Ripley wrote : That Depends line is about source installs. >>> >>> I can't see that documented in either Writing R Extensions or >>> ?install.packages. Is it somewhere else? I thought

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Prof Brian Ripley
On 07/06/2012 12:49, Matthew Dowle wrote: On 07/06/2012 11:40, Matthew Dowle wrote: Prof Ripley wrote : That Depends line is about source installs. I can't see that documented in either Writing R Extensions or ?install.packages. Is it somewhere else? I thought Depends applied to binaries fro

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Matthew Dowle
> On 07/06/2012 11:40, Matthew Dowle wrote: >> >> Prof Ripley wrote : >>> That Depends line is about source installs. >> >> I can't see that documented in either Writing R Extensions or >> ?install.packages. Is it somewhere else? I thought Depends applied to >> binaries from CRAN too, which is the

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Prof Brian Ripley
On 07/06/2012 11:40, Matthew Dowle wrote: Prof Ripley wrote : That Depends line is about source installs. I can't see that documented in either Writing R Extensions or ?install.packages. Is it somewhere else? I thought Depends applied to binaries from CRAN too, which is the default method on

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Matthew Dowle
Prof Ripley wrote : > That Depends line is about source installs. I can't see that documented in either Writing R Extensions or ?install.packages. Is it somewhere else? I thought Depends applied to binaries from CRAN too, which is the default method on Windows and Mac. Matthew _

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Prof Brian Ripley
On 07/06/2012 11:12, Matthew Dowle wrote: Prof Ripley wrote : (AFAIK the CRAN binary package providers expect users to be using the current version of R.) I guess it's quite common practice for very many users to fail that expectation. I for one do. I'm used to seeing "Warning: package was b

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Matthew Dowle
Prof Ripley wrote : > (AFAIK the CRAN binary package providers expect users to be > using the current version of R.) I guess it's quite common practice for very many users to fail that expectation. I for one do. I'm used to seeing "Warning: package was build using " when installing from CRAN. Bu

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-07 Thread Prof Brian Ripley
On 06/06/2012 21:04, peter dalgaard wrote: FYI, Brian has backed out the changes to identical() in r59533 of R-patched. Please retry your test codes with the new version. (Due to some ISP mess-up, Brian is temporarily unable to reply in detail himself.) -pd Some comments (now my ISP has repa

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-06 Thread peter dalgaard
FYI, Brian has backed out the changes to identical() in r59533 of R-patched. Please retry your test codes with the new version. (Due to some ISP mess-up, Brian is temporarily unable to reply in detail himself.) -pd On Jun 6, 2012, at 20:29 , wrote: > On Wed, 6 Jun 2012, Matthew Dowle wrote

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-06 Thread luke-tierney
On Wed, 6 Jun 2012, Matthew Dowle wrote: Dan Tenenbaum fhcrc.org> writes: I know this has come up before on R-help (http://r.789695.n4.nabble.com/7-arguments-passed-to-Internal-identical-which- requires-6-td4548460.html) but I have a concise reproducible case that I wanted to share. Also,

Re: [Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-06 Thread Matthew Dowle
Dan Tenenbaum fhcrc.org> writes: > > I know this has come up before on R-help > (http://r.789695.n4.nabble.com/7-arguments-passed-to-Internal-identical-which- requires-6-td4548460.html) > but I have a concise reproducible case that I wanted to share. > > Also, please note the Bioconductor scena

[Rd] 7 arguments passed to .Internal(identical) which requires 6

2012-06-05 Thread Dan Tenenbaum
I know this has come up before on R-help (http://r.789695.n4.nabble.com/7-arguments-passed-to-Internal-identical-which-requires-6-td4548460.html) but I have a concise reproducible case that I wanted to share. Also, please note the Bioconductor scenario which is potentially seriously impacted by th