Re: [Rd] make error for R 2.13.0 (and 2.12.0)

2010-11-22 Thread Tom "spot"; Callaway
On 11/05/2010 07:59 AM, Johann Hibschman wrote: > "Tom \"spot\" Callaway" writes: > >> Full build log is here: >> http://koji.fedoraproject.org/koji/getfile?taskID=2571563&name=build.log >> >> Default gcc in RHEL 4 is 3.4.6-10, which has g

Re: [Rd] make error for R 2.13.0 (and 2.12.0)

2010-11-02 Thread Tom "spot"; Callaway
On 10/18/2010 03:03 AM, Peter Dalgaard wrote: > On 10/18/2010 02:39 AM, Radford Neal wrote: >> Regarding Tengfei Yin's post about an error trying to install >> "cluster" in 2.13.0, I have gotten an error with this package when >> trying to install the released version of 2.12.0. Here is the output

Re: [Rd] Stack smashing in RODBC

2010-01-26 Thread Tom "spot"; Callaway
On 01/26/2010 06:17 AM, Dirk Eddelbuettel wrote: > > On 26 January 2010 at 01:23, "Tom \"spot\" Callaway" wrote: > | On 01/25/2010 09:14 PM, Dirk Eddelbuettel wrote: > | > I cannot replicate this on Debian. The error gets trapped just fine. This > may >

Re: [Rd] Stack smashing in RODBC

2010-01-25 Thread Tom "spot"; Callaway
On 01/25/2010 09:14 PM, Dirk Eddelbuettel wrote: > I cannot replicate this on Debian. The error gets trapped just fine. This may > be particular to your builds or setup. I don;t see an R error (but of course > do not speak for R Core). Here is a short version, it is the same in normal > interactive

[Rd] Stack smashing in RODBC

2010-01-25 Thread Tom "spot"; Callaway
This is R 2.10.1, from Fedora 12 and RODBC 1.3-1 (although 1.3-0 has the same problem) on i686. Originally reported here: https://bugzilla.redhat.com/show_bug.cgi?id=557953 Reproducer and output below: [s...@f12.i386 src]$ R R version 2.10.1 (2009-12-14) Copyright (C) 2009 The R Foundation for

[Rd] HAVE_BZLIB_H not set

2008-10-26 Thread Tom "spot"; Callaway
When building 2.8.0 this morning for Fedora, I noticed that it was building the included bzlib2 source and using it rather than the system bzip2 libraries and headers. I tracked down the reason to this section of configure: cat >>conftest.$ac_ext <<_ACEOF /* end confdefs.h. */ #ifdef HAVE_BZLIB_

[Rd] Configure error when compiling on "sh" architecture

2008-10-16 Thread Tom &quot;spot"; Callaway
Amusingly enough, the SuperH (or sh for short) architecture isn't one of the many I have handy, but someone seems to be porting Fedora to that arch. They filed a bug against R, which isn't really an R bug, but is more an inherited bug from autoconf. Specifically, the R configure script invokes gcc(

Re: [Rd] Security issue with javareconf script (PR#12636)

2008-08-29 Thread Tom &quot;spot"; Callaway
On Fri, 2008-08-29 at 20:04 +0200, Peter Dalgaard wrote: > OK, committed. Not the easiest hole to exploit, I'd say (notice that > we > only compile something, not execute it). > > > . > > Oh, sh*! This is not portable! Needs code like INSTALL. Will refix. Sorry about that. I forgot that pe

Re: [Rd] make check-all fails on F8

2007-11-09 Thread Tom &quot;spot"; Callaway
On Fri, 2007-11-09 at 11:41 -0600, Marc Schwartz wrote: > I have been looking ("tunnel vision") at this now for several hours > going back to last night, and am probably missing something basic here, > but is this the result of a change in the behavior of diff on F8, or is > something else going

[Rd] Support for noarch packages in /usr/share/R/library

2007-03-13 Thread Tom &#x27;spot'; Callaway
As originally raised here: https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=231220 It has been proposed that R should support noarch packages in /usr/share/R/library in addition to architecture specific packages in /usr/lib/R/library or /usr/lib64/R/library. For example, the mAr addon doesn't

Re: [Rd] eval(match.call()) (PR#9339)

2006-11-04 Thread Tom &#x27;spot'; Callaway
zed memory at the end of ".Primitive". > > > > (This is in a copy of R source from June 2006.) I was halfway to identifying this when Bill figured it out. :) New packages are built for FC-4, FC-5, FC-6, and devel which bring us up to the 11-03 patched level. Thanks for the

Re: [Rd] looks in liblapack.a not liblapack.so

2005-09-28 Thread Tom &#x27;spot'; Callaway
discussion of lapack and its patching) Thanks, ~spot -- Tom "spot" Callaway: Red Hat Senior Sales Engineer || GPG ID: 93054260 Fedora Extras Steering Committee Member (RPM Standards and Practices) Aurora Linux Project Leader: http://auroralinux.org